3NG0,1HTO,4LNI


Conserved Protein Domain Family
GlnA

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TIGR00653: GlnA 
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glutamine synthetase, type I
Alternate name: glutamate--ammonia ligase. This model represents the dodecameric form, which can be subdivided into 1-alpha and 1-beta forms. The phylogeny of the 1-alpha and 1-beta forms appears polyphyletic. E. coli, Synechocystis PCC6803, Aquifex aeolicus, and the crenarcheon Sulfolobus acidocaldarius have form 1-beta, while Bacillus subtilis, Thermotoga maritima, and various euryarchaea has form 1-alpha. The 1-beta dodecamer from the crenarcheon Sulfolobus acidocaldarius differs from that in E. coli in that it is not regulated by adenylylation. [Amino acid biosynthesis, Glutamate family]
Statistics
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PSSM-Id: 273198
Aligned: 13 rows
Threshold Bit Score: 650.191
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3NG0_A         6 QEVLKWIQD-ENIKIIDLKFIDTPGIWQHCSFYYDQLD------ENSFTEGIPFDGSSIRGWKAINESDMCMVPDPNTAT 78  Synechocystis s...
Q60182        10 EQAIEYVKK-NNVKFIRFQFVDILGFPKNVAYPVKAGEkgieelREIFENGVWFDGSSITGFVGIEESDMLLKPDLSTLS 88  Methanocaldococ...
O27612         6 GRIIAKMDE-CGVKFVRLQFVDIHGKPKNMAIPLVRPdq----iEDIIKDGLLFDGSSVEGFVDINESDLVLKPDPDTFS 80  Methanothermoba...
O58097         6 NIIKGNEGQgKRIKFVQLIFVDINGMPKGMEVPITRL-------EEAIEEGIAFDGSSVPGFQGIEDSDLVFKADPSTYV 78  Pyrococcus hori...
Q10377         7 DDVFKLAKD-EKVEYVDVRFCDLPGIMQHFTIPASAFD------KSVFDDGLAFDGSSIRGFQSIHESDMLLLPDPETAR 79  Mycobacterium t...
O66514         7 EEVLDLIQK-EGVQYVDLRFSDPFGQWQHLTIPAYEIS------KETFEVGRGFDGSSIRGWQSINESDMLAKPDPNTAF 79  Aquifex aeolicu...
P43794         8 ANVFKLIEE-NNVKFVLLRFTDIKGKEHGVSIPVSLVD------EDMFEDGKMFDGSSVEGWKTINKADMLLMPMAETAI 80  Haemophilus inf...
P94845        13 KEFFEFCKE-NEVEFVDFRFSDIKGTWNHIAYSFGALT------HGMLKEGIPFDASCFKGWQGIEHSDMILTPDLVRYF 85  Helicobacter py...
WP_001271717   4 EHVLTMLNE-HEVKFVDLRFTDTKGKEQHVTIPAHQVN------AEFFEEGKMFDGSSIGGWKGINESDMVLMPDASTAV 76  Enterobacteriaceae
O29313        14 ERAKAVLKE-NNVRQVLCAFADVRGYLQMFSIPAREFVd-----GSAFENGIGFDGSSVRGFRTIEKSDMVWMPDASSLK 87  Archaeoglobus f...
1HTO_A         6 DDVFKLAKD-EKVEYVDVRFCDLPGIMQHFTIPASAFD------KSVFDDGLAFDGSSIRGFQSIHESDMLLLPDPETAR 78  Mycobacterium t...
4LNI_A         6 EDIEKLVKE-ENVKYIRLQFTDILGTIKNVEIPVSQLG------K-ALDNKVMFDGSSIEGFVRIEESDMYLYPDLNTFV 77  Bacillus subtilis
WP_010866819   3 ETGPQRDKDgQREGRVLVHYTDIAGYLRQVEVPLRNVE------K---EFVASFDGSSVYGFTPVEDSDLLLKHVPETLV 73  Aeropyrum pernix
3NG0_A        79 IDPFCKEP---TLSMICSIKEPrTGEWYNRDPR-TIAAKAAEYLRgtGIADTVYFGPEAEFFLFDDIRFGQTenssyyfa 154 Synechocystis s...
Q60182        89 VLPWRPEEk-sVARVICDVYKD-EKTPFEGDPR-SRLKAILEELKk-EMNGEYFVGPEPEFFLLKRDPHNPH-------- 156 Methanocaldococ...
O27612        81 TLPWRPEEk-gVCRFICDIYWP-DGKPFEGDPR-YVLKRALDKYa--HLGYEYNVGPEPEFFILDQDEDG---------- 145 Methanothermoba...
O58097        79 EVPWDN-----VARVYGYIYK--DGKPYEADPR-GVLRRTLERLe--KLGIKVYIGPEPEFYLFKKNGSW---------- 138 Pyrococcus hori...
Q10377        80 IDPFRAAK---TLNINFFVHDPfTLEPYSRDPR-NIARKAENYLIstGIADTAYFGAEAEFYIFDSVSFDSRangsfyev 155 Mycobacterium t...
O66514        80 IDPFIEPK---TLVMICDIYDPvTGERYGRDTR-YIAQKAEQYLKqtGIGDTAYFGPEAEFFIFDSVEFGTAanyafwrv 155 Aquifex aeolicu...
P43794        81 VDPFAQIP---TLSIRCSVYEPtTMQSYDRDPR-SIAIRAENYMRstGIADQAFFGPEPEFFLFDDVRFNVSmnkasfsi 156 Haemophilus inf...
P94845        86 IDPFSADV---SVVVFCDVYDVyKNQPYEKCPR-SIAKKALQHLKdsGLGDVAYFGAENEFFIFDSIKIKDAsnsqyyev 161 Helicobacter py...
WP_001271717  77 IDPFFADS---TLIIRCDILEPgTLQGYDRDPR-SIAKRAEDYLRstGIADTVLFGPEPEFFLFDDIRFGSSisgshvai 152 Enterobacteriaceae
O29313        88 IIPWIDDPiqkSAIMFGNVYEAwGTEIADCDPRgYVAKRYEDMLK--SEGMSAIFGPEIEFFLFEGVDFTRLswdmwvsp 165 Archaeoglobus f...
1HTO_A        79 IDPFRAAK---TLNINFFVHDPfTLEPYSRDPR-NIARKAENYLIstGIADTAYFGAEAEFYIFDSVSFDSRangsfyev 154 Mycobacterium t...
4LNI_A        78 IFPWTAEKg-kVARFICDIYNP-DGTPFEGDPR-NNLKRILKEMEd-LGFSDFNLGPEPEFFLFKLDEKGEP-------- 145 Bacillus subtilis
WP_010866819  74 SVPWRSG----LWRVIATVYNA-TRERSPRDPR-LAAETAEKIMs--SMGYRVKAGAEIEFFIFDKIGVDVLnparglgy 145 Aeropyrum pernix
3NG0_A       155 dsveg----rwntgreeeggnlGYKPGYKQGYFPVAPTDTAQDIRTEMLLTMAAFGVPIEKHHHEVASgG-QNELGIKFD 229 Synechocystis s...
Q60182       157 ----------------------RWVPADDGGYFDVEPLDDAPDIRRDIVLALENLGFHVEASHHEVAP-G-QHEVDFKFD 212 Methanocaldococ...
O27612       146 ----------------------NIIPHDCGAYFDVEPVDQGTDFRRKLVMDLEALNFDVEVSHHEVAP-G-QHEIDFKFD 201 Methanothermoba...
O58097       139 ----------------------ELEIPDVGGYFDILTLDKAKDIKREIAEYMPYFGLTPEVLHHEVGK-A-QHEIDFRHD 194 Pyrococcus hori...
Q10377       156 daisgww-ntgaateadgspnrGYKVRHKGGYFPVAPNDQYVDLRDKMLTNLINSGFILEKGHHEVGS-GgQAEINYQFN 233 Mycobacterium t...
O66514       156 dse--------egwwnrevpssGYKIPHKRGYFPAPPVDKMMQLRNEMVSIMSDLGIIVELHHHEVAT-AgQGEIDIRYD 226 Aquifex aeolicu...
P43794       157 ddiea----awntnkkyeegnnAYRPLKKGGYCAVAPIDSAHDIRSEMCLILEEMGLVIEAHHHEVAT-AgQNEIATKFN 231 Haemophilus inf...
P94845       162 dseege---wnrdrsfengvnfGHRPGKQGGYMPVPPTDTMMDIRTEIVKVLNQVGLETFVVHHEVAQ-A-QGEVGVKFG 236 Helicobacter py...
WP_001271717 153 ddieg----awnsstqyeggnkGHRPAVKGGYFPVPPVDSAQDIRSEMCLVMEQMGLVVEAHHHEVATaG-QNEVATRFN 227 Enterobacteriaceae
O29313       166 nggagdswgpprimpisselesGYMIRPKEGYFRPPPEDTTVEYRNELVYYLEQLGIDIEYHHHEVAT-AgQVELDFKPK 244 Archaeoglobus f...
1HTO_A       155 daisgww-ntgaateadgspnrGYKVRHKGGYFPVAPNDQYVDLRDKMLTNLINSGFILEKGHHEVGS-GgQAEINYQFN 232 Mycobacterium t...
4LNI_A       146 ----------------------TLELNDKGGYFDLAPTDLGENCRRDIVLELEEMGFEIEASHHEVAP-G-QHEIDFKYA 201 Bacillus subtilis
WP_010866819 146 iv----------esreqpggqdGIFGQVKKSYHMPEPPDSLLDYRLMLTETLQRFKVDVAVSHHEVAV-S-QVEVSIGSR 213 Aeropyrum pernix
3NG0_A       230 K-LVNSADNLMIYKYVIKNVAKKYGKTVTFMPKPIFNDNGSGMHVHQSLWK----DGQPLFAGDK--YAgFSQMGLWYIG 302 Synechocystis s...
Q60182       213 N-ALKTADSVITFKMTIKNIAKKHGLKATFMPKPFFGMNGNGMHCHQSVWF----NGEPSFYDPEgpYNgLSETCLSYIA 287 Methanocaldococ...
O27612       202 K-ALKTADAVITFKQAIKAIVDKIGYMVTFMPKPFFGENGSGMHCHQSLFK----DGENVFYDPDteTQ-LSEEALYFIG 275 Methanothermoba...
O58097       195 E-ALKTADNIVSFKYIVKAVAEMHGLYATFMPKPIYGMPGNGMHLHISLWK----DGENIFKGEEg----LSETALYFIG 265 Pyrococcus hori...
Q10377       234 S-LLHAADDMQLYKYIIKNTAWQNGKTVTFMPKPLFGDNGSGMHCHQSLWK----DGAPLMYDETg-YAgLSDTARHYIG 307 Mycobacterium t...
O66514       227 S-LLNQADKLFLYKYIVRMVAAKHGKYATFMAKVLPNDNGSGMHTHFSIWK----NGENLFAGSE--YAgLSKTALYAIG 299 Aquifex aeolicu...
P43794       232 T-LTLKADETQIYKHVVQNVALEHGKTACFMPKPITGDNGSGMHCNMSLSK----DGKNIFQGDK--YAgLSETALYYIG 304 Haemophilus inf...
P94845       237 D-LVEAADNVQKLKYVVKMVAHLNGKTATFMPKPLYGDNGSGMHTHVSVWK----NNENLFSGET--YKgLSEFALHFLG 309 Helicobacter py...
WP_001271717 228 T-MTKKADEIQIYKYVVHNVAHRFGKTATFMPKPMFGDNGSGMHCHMSLSK----NGVNLFAGDK--YAgLSEQALYYIG 300 Enterobacteriaceae
O29313       245 Q-LVDVGDAFYLYKFAAKNIAAMHGLYATFMPKPLYLDNASGMHTHQSLWKgepfSGEAVFADPDdeYM-LSQKARYYIG 322 Archaeoglobus f...
1HTO_A       233 S-LLHAADDMQLYKYIIKNTAWQNGKTVTFMPKPLFGDNGSGMHCHQSLWK----DGAPLMYDETg-YAgLSDTARHYIG 306 Mycobacterium t...
4LNI_A       202 G-AVRSCDDIQTFKLVVKTIARKHGLHATFMPKPLFGVNGSGMHCNLSLFK----NGVNAFFDENa-DLqLSETAKHFIA 275 Bacillus subtilis
WP_010866819 214 TsLARLGDDIMTVKWVSKVLARMDGRVATFMPKPIFGDNGSGMHIHLSLWSp---GGENLFAGHg--DSdLSETALHFIA 288 Aeropyrum pernix
3NG0_A       303 GILKHAPALLAFTNPTTNSYKRLVPGFEAPVNLAYSQGNRSASVRIPLSgGn-PKAKRLEFRCPDATSNPYLAFAAMLCA 381 Synechocystis s...
Q60182       288 GILSHAKALVAITNPTVNSYKRLVPGYEAPVNIAWANKNRSAIIRVPAA-R--GKATRIEFRAPDPTCNPYLAFACMLAA 364 Methanocaldococ...
O27612       276 GLLKHAPALTAVCAPTVNSYKRLVPGYEAPVYIAYGLKNRSTLIRIPAS-R--GKGTRVELRMPDPSCNPYLAFAAMLEA 352 Methanothermoba...
O58097       266 GLLKHAKALAAVTNPTVNSYKRLVPGYEAPVYISWGYKNRSALIRVPAF-W--GNGARIEYRCPDPSANSYLAFAAILMA 342 Pyrococcus hori...
Q10377       308 GLLHHAPSLLAFTNPTVNSYKRLVPGYEAPINLVYSQRNRSACVRIPIT-GsnPKAKRLEFRSPDSSGNPYLAFSAMLMA 386 Mycobacterium t...
O66514       300 GILKHGPAIAAFTNPTVNSYHRLVPGYEAPVRLAYSARNRSAAIRIPMY-SqnPKAKRIEVRFPDATSNPYLAFAAILMA 378 Aquifex aeolicu...
P43794       305 GIIKHAKALNAFTNPSTNSYKRLVPGYEAPVLLAYSASNRSASIRIPAV-Tn-PKAIRVEARFPDPLANPYLAFAALLMA 382 Haemophilus inf...
P94845       310 GVLRHARGLAAFTNASTNSYKRLIPGYEAPSILTYSANNRSASVRIPYG-Is-KNSARFEFRFPDSSSNPYLAFAAILMA 387 Helicobacter py...
WP_001271717 301 GVIKHAKAINALANPTTNSYKRLVPGYEAPVMLAYSARNRSASIRIPVV-Ss-PKARRIEVRFPDPAANPYLCFAALLMA 378 Enterobacteriaceae
O29313       323 GLLEHAKALTALCAPTVNSYKRLVPGFEAPIYICWSPRNRSALVRVPMY-VkkPSAIRVEYRGVDPSCNPYLAITAQLAA 401 Archaeoglobus f...
1HTO_A       307 GLLHHAPSLLAFTNPTVNSYKRLVPGYEAPINLVYSQRNRSACVRIPIT-GsnPKAKRLEFRSPDSSGNPYLAFSAMLMA 385 Mycobacterium t...
4LNI_A       276 GIVKHATSFTAVTNPTVNSYKRLVPGYEAPCYVAWSAQNRSPLIRIPAS-R--GISTRVEVRSVDPAANPYLALSVLLAA 352 Bacillus subtilis
WP_010866819 289 GILEHARSLSAILSPTTNSYRRLVAGYEAPVYVAWGWRNRSAMIRIPASaGn-IDAVRIEVRSPDPTANPYLALAALFMA 367 Aeropyrum pernix
3NG0_A       382 GIDGIKNQIDPGEPLDVDIYDLSPEELAK--IPSTPGSLEAALEALEKDhefLTGTGVFSPDFVESWIEYKLdNEVNPMR 459 Synechocystis s...
Q60182       365 GLDGIKKKMTAPEPVERNIFKMSEEEKKQlgIESVPANLAAALDELECD---EVLQKALGKHIYENYMEIKR-AEWDDFR 440 Methanocaldococ...
O27612       353 GMNGIQNKIDPGEPTEIDVYEKSMSELREmgIETLPSSLWEAYHALEED---DVIKGALGGHVYEKFMEIKH-REWDDYR 428 Methanothermoba...
O58097       343 GLDGIKHKIEPFAYVEENVYEMDEKRREEigIDMLPENLGEALDELERD---KVVKEALGG-AYRNFVGYKR-KEWEEYL 417 Pyrococcus hori...
Q10377       387 GLDGIKNKIEPQAPVDKDLYELPPEEAAS--IPQTPTQLSDVIDRLEADheyLTEGGVFTNDLIETWISFKReNEIEPVN 464 Mycobacterium t...
O66514       379 AIDGIENEIDPGEPFDKDIYSLPPEELEG--IPQLPGSLEEALKALEEDyefLLKGNVFTEEFIQLWIESKR-AEIDELR 455 Aquifex aeolicu...
P43794       383 GLDGVVNKIHPGDAMDKNLYDLPPEELKD--IPAVASSLEEALNSLEKDyefLTQGGVFAKDFIDAFISIKR-KEVERLN 459 Haemophilus inf...
P94845       388 GMDGVKNKIDPGEAMDINLFKLTLDEIREkgIKQMPHTLRRSLEEMLADkqyLKESQVFSEEFIQAYQSLKFnAEVFPWE 467 Helicobacter py...
WP_001271717 379 GLDGIKNKIHPGEAMDKNLYDLPPEEAKE--IPQVAGSLEEALNELDLDrefLKAGGVFTDEAIDAYIALRR-EEDDRVR 455 Enterobacteriaceae
O29313       402 GLDGIKKKIDPGDPLLEDVYELTPAQKRElgVGELPTTLRDAIDHLASD---ELMQEVLGSHIFDAFMELKI-DEWNQYC 477 Archaeoglobus f...
1HTO_A       386 GLDGIKNKIEPQAPVDKDLYELPPEEAAS--IPQTPTQLSDVIDRLEADheyLTEGGVFTNDLIETWISFKReNEIEPVN 463 Mycobacterium t...
4LNI_A       353 GLDGIKNKLEAPAPIDRNIYVMSKEERMEngIVDLPATLAEALEEFKSn---EVMVKALGEHLFEHFIEAKE-IEWDMFR 428 Bacillus subtilis
WP_010866819 368 GLDGVKKKLAPPDPYEGNLYKISPEELREkgIKTLPRNLDEALDELESDn--DYLKPAFTREMLESYIEVKR-KESEDTR 444 Aeropyrum pernix
3NG0_A       460 ------------LRPHPYEFSLYYD 472 Synechocystis sp. PCC 6803
Q60182       441 ------------TAVTDWETGKYLI 453 Methanocaldococcus jannaschii DSM 2661
O27612       429 ------------VRVFKYELERYLD 441 Methanothermobacter thermautotrophicus str. Delta H
O58097       418 dyleaknlpkdtKNVTEWELERYFF 442 Pyrococcus horikoshii OT3
Q10377       465 ------------IRPHPYEFALYYD 477 Mycobacterium tuberculosis
O66514       456 ------------FIPHPKEFELYWD 468 Aquifex aeolicus VF5
P43794       460 ------------MAPHPVEFEMYYA 472 Haemophilus influenzae Rd KW20
P94845       468 ------------SKPHPFEFITTYS 480 Helicobacter pylori 26695
WP_001271717 456 ------------MTPHPVEFELYYS 468 Enterobacteriaceae
O29313       478 ------------LYITPWEFMKYFD 490 Archaeoglobus fulgidus DSM 4304
1HTO_A       464 ------------IRPHPYEFALYYD 476 Mycobacterium tuberculosis
4LNI_A       429 ------------TQVHPWEREQYMS 441 Bacillus subtilis
WP_010866819 445 ------------LYPHPIEVYKYLN 457 Aeropyrum pernix
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