3JUI,1PAQ


Conserved Protein Domain Family
W2_eIF2B_epsilon

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cd11558: W2_eIF2B_epsilon 
Click on image for an interactive view with Cn3D
C-terminal W2 domain of eukaryotic translation initiation factor 2B epsilon
eIF2B is a heteropentameric complex which functions as a guanine nucleotide exchange factor in the recycling of eIF-2 during the initiation of translation in eukaryotes. The epsilon and gamma subunits are sequence similar and both are essential in yeast. Epsilon appears to be the catalytically active subunit, with gamma enhancing its activity. The C-terminal domain of the eIF2B epsilon subunit contains bipartite motifs rich in acidic and aromatic residues, which are responsible for the interaction with eIF2. The structure of the domain resembles that of a set of concatenated HEAT repeats.
Statistics
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PSSM-Id: 211396
Aligned: 80 rows
Threshold Bit Score: 69.2099
Created: 8-Dec-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
putativeputative
Conserved site include 1 residue -Click on image for an interactive view with Cn3D
Feature 1: putative essential glutamate, 1 residue position
Conserved feature residue pattern:EClick to see conserved feature residue pattern help
Evidence:
  • Comment:In Saccharomyces cerevisiae, mutations of E to A at this position are lethal

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                     #                                                  
3JUI_A         9 DDIKVFQNEVLGTLQRGKEENIsCDNLVLEINSLKYAYNISlKEVXQVLSHVVLEfplqqxds----------------- 71  human
XP_627686    592 EDSREFFEESVLLIKSGLENPVhMSNKILELKGLRFAFFKDdLDILDTCIIMALDllgknskeflv-------------- 657 Cryptosporidium...
XP_002180835 576 QKGVDVIKELKSICLEYEPASP-IENLAIELNSFKFSQNATyVDCTTAATLAILEqmsitkd------------------ 636 Phaeodactylum t...
EEE26696     602 GDDSAFASEIRAMCQEGLSEPQhMQHKVLEMKSFRLASNKTdLEVAQVILPVFLEtiafaadggapkkdtwekfiatrra 681 Toxoplasma gond...
XP_002294866 723 QKGVDVVKELRDICLEHEMSSP-VENLRIELNSFKFSQNATyGDCCKGAMMAVMDkvleksdn----------------- 784 Thalassiosira p...
CBN76046     465 DGSEAFHQVVKDMLLNGHQEGHpLDNLLLEIKSYKFAQNREfKECMRPAVELVLDlagadtg------------------ 526 Ectocarpus sili...
CCA17620     560 TKNPSFERILHDLIIAGDRDGHdTDDLFLEIKSCKFAHNRTfVDVIHALIPALMEsiqlnkd------------------ 621 Albugo laibachi...
EGF78579     512 ALPHSFDEYAPAKIYQELLAEVaPSLLLVDIDDLATTLHATsHQCLVAVIQAALQicerkg------------------- 572 Batrachochytriu...
EGX46838     510 SEADSFFREAYNSLLGALKQSHsVDIMILELNGLRMSANAEfSEVRRATAAAVISyivskit------------------ 571 Arthrobotrys ol...
EGZ21777     557 AVEVPFQQIIRENVCTGDAAGHnVDDLFMEIKSFKFAQNRSfAEVIGAIVPGLLDliptgnr------------------ 618 Phytophthora sojae
Feature 1                                                                                        
3JUI_A        72 --pldssrycALLLPLLKAWSPVFRNYIk-------rAADHLEALAAIEDFFLEhe------aLGISXAKVLXAFYQLEI 136 human
XP_627686    658 eekgfnnnnsTSTRIDLDRFRSFCEKKGilelvsafnRSEDEAFTGLICSKLLEfal---kkdFPLPFGSLLVTFERLDL 734 Cryptosporidium...
XP_002180835 637 ---ttdgklvQEFKSYLDHWAPLLQKMSi-------gLDEEKGIVLALEQCALEsnergqtlsSGTSFRFLLQTLHDEEI 706 Phaeodactylum t...
EEE26696     682 gllfssflsnAHPEDLVPLWSICLDFCMrptrtvsvySGPQKEGEGDDTEAETVtrdn--plfGSTVFCSLCEVLHSCDL 759 Toxoplasma gond...
XP_002294866 785 ---ptpgklvASLRTMLSYWGSLFQSICi-------gSEEEKAIIHALETMALGsgkgsvalaTEPAFRFVLQTLHDQEI 854 Thalassiosira p...
CBN76046     527 ----ngmalvAAVKTQLRHWKPLLSKLNv-------eAGDDVEMIKVVESYALRpec---egtLRAVFRYVVQSFFQEEM 592 Ectocarpus sili...
CCA17620     622 ----digktlENVRSKFQKWHSVVERCLv-------dSSDQLAVLEALETYTIDplh---sitWMSWFRYLLQIVYDREW 687 Albugo laibachi...
EGF78579     573 -----hwmckVKLVEFFQRYHILISRFId-------nQSDQLLALAAIEEYCNGsl------kRRAYHLKIIMCLYQLDV 634 Batrachochytriu...
EGX46838     572 ----snentsKVVDATVEKLLPLFNRMIf-------eVNDQAELLGYIQRELAGke------rGGTLMQAIGMKLYNEDL 634 Arthrobotrys ol...
EGZ21777     619 ---qsamtilGNVRTKFQKWSSVIQRCLv-------eQEDQLAVVDALEGYCTEpeer--rviWLPLFRFLLQTVYDLEW 686 Phytophthora sojae
Feature 1                                                           
3JUI_A       137 LAGETILSWFsqr--------dttDKGQQLRKNQQLQRFIQWLKEAEEESS 179 human
XP_627686    735 INQSFIPNWYdsviggsgtetktkDEVLSILRSDFVVKYIEWLKEDEEDDE 785 Cryptosporidium parvum Iowa II
XP_002180835 707 VSDEAILSWAadrqe-----dadgSRLKKLLDLPLVKDFLEWLEQESEDED 752 Phaeodactylum tricornutum CCAP 1055/1
EEE26696     760 LDADLSLPLWyrhkt----qgdlrEDEKAFLNSPRLKAFVEWLEEEDASDE 806 Toxoplasma gondii GT1
XP_002294866 855 VNEDAIFEWAaerke-----eekgSPRGALFWQKPTQDFLEWLEEESDNDS 900 Thalassiosira pseudonana CCMP1335
CBN76046     593 VSEDCLERWIqlrra-----tpqgSPERGLFEQKEVQAFVAWLEDSESSSG 638 Ectocarpus siliculosus
CCA17620     688 CFESVILEWYesree-----saadFKVRALVKDEKVVEFIEWLRNVEEDSA 733 Albugo laibachii Nc14
EGF78579     635 VDAELLITWFdr----------giATNDLNDVRNLCSEFMDWLEEQVSDDD 675 Batrachochytrium dendrobatidis JAM81
EGX46838     635 CDDEGLLKWWnegn------gpqgETPEMTKVRDGAKAFVKWVEEQDEDED 679 Arthrobotrys oligospora ATCC 24927
EGZ21777     687 VSEDVILEWHeakqan--adedeaSDALAAASKKDVQEFIDWLQESEEEDS 735 Phytophthora sojae

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