1PL5,1NYH


Conserved Protein Domain Family
Sir4_CC_C

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cd22863: Sir4_CC_C 
Click on image for an interactive view with Cn3D
C-terminal coiled coil domain found in Saccharomyces cerevisiae silent information regulator 4 (Sir4p) and similar proteins
Sir4p is a regulatory protein that plays important roles in silent chromatin at telomeric and silent mating type loci. It physically interacts with another two silent information regulators, Sir2p and Sir3p, to form a complex that may regulate chromatin structure. The C-terminus of Sir4p is critical for its functions in vivo. This model corresponds to the C-terminal coiled coil domain of Sir4. Coiled coil dimerization is essential for telomeric and mating type silencing in Saccharomyces cerevisiae.
Statistics
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PSSM-Id: 439379
Aligned: 7 rows
Threshold Bit Score: 104.158
Created: 14-Oct-2021
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
homodimer
Conserved site includes 31 residues -Click on image for an interactive view with Cn3D
Feature 1:homodimer interface [polypeptide binding site]
Evidence:
  • Structure:1PL5: Saccharomyces cerevisiae SIR4 C-terminal coiled coil forms a homodimer; contacts at 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1           #  ##  #  #   ##     #  ##  ## ##  #  ##  ## ##  ## ##  #   ##  ##     #      
1PL5_A         56 SFVDIVLSKAASALDEKEKQLAVANEIIRSLSDEVMRNEIRITSLQGDLTFTKKCLENAr-SQISEKDAKINKLMEKDFQ 134  baker's yeast
1NYH_A         80 SFVDIVLSKAASALDEKEKQLAVANEIIRSLSDEVMRNEIRITSLQGDLTFTKKCLENAr-SQISEKDAKINKLMEKDFQ 158  baker's yeast
P11978       1272 SFVDIVLSKAASALDEKEKQLAVANEIIRSLSDEVMRNEIRITSLQGDLTFTKKCLENAr-SQISEKDAKINKLMEKDFQ 1350 Saccharomyces...
GAV46834      777 AYVQELLQQASGALDKRDAQLKAAHSIILALSRDVMHQEVQITSLTGQLKYSKKELDRQt-ELAEQYRLCMAEQEVEMAQ 855  Zygosaccharom...
XP_003679534 1329 QFVRTIIEDATNALEEKDKQIEAARKLILALSREVMQKELSITSLSGRLRAAEHEIKEQklTLDDYAVTLAEKELDIMRM 1408 Torulaspora d...
XP_004181867 2132 KYMTSLLEDANATLDRKDYELLKAQKIIEALSTEVLDSQIQIATLTSTLNLYKRKYENI--SQNKNNISGRSTQEPKWKK 2209 Tetrapisispor...
NP_010513    1272 SFVDIVLSKAASALDEKEKQLAVANEIIRSLSDEVMRNEIRITSLQGDLTFTKKCLENAr-SQISEKDAKINKLMEKDFQ 1350 Saccharomyces...

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