2YTX,2YTY,2YTV,3L0O,1WFQ,1A8V,3AQQ,1G6P,1H95,1X65,2IX1


Conserved Protein Domain Family
CSP

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smart00357: CSP 
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Cold shock protein domain
RNA-binding domain that functions as a RNA-chaperone in bacteria and is involved in regulating translation in eukaryotes. Contains sub-family of RNA-binding domains in the Rho transcription termination factor.
Statistics
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PSSM-Id: 214633
Aligned: 59 rows
Threshold Bit Score: 44.8971
Created: 13-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2YTX_A       20 QGVVCAMK--EAFGFIERGDVv---KEIFFHYSEfkgdLETLQPGDDVEFTIk---dRNGKEVATDVRLL 81  human
O67834       69 TGTVIAYP--GGFGFLEVEGG----KDIYIPPFE----MVKVFHGDVVKAKVt---eFKGKKEVRIIKVL 125 Aquifex aeolicus
Q46363       68 EARLRCSS--KGFCFAIQDDEd--aTDIYVREGN----LSNAWNGDRVLVKVik--dGTRRKSPEEQVHL 127 Synechocystis sp. PCC 6803
ZP_01784966  23 EGVVKSTD--KAYGFLECDK-----KTYFIAPPS----MKKVMHGDKIKATIe---kQGDKEQAEPEVLI 78  Haemophilus influenzae 22....
NP_391241   138 QRVVGTYTetRNFGFVIPDDKki-tSDIFIPKNG----KNGAAEGHKVVVKLtsypeGRMNAEGEVETIL 202 Bacillus subtilis subsp. s...
AAA62192     90 KGYVIGHK--DGHGWVRPEGSvgkdDDILLPHHQ----MKNIIHGDFVLVQPtd-nsKRGRREGRLVRVL 152 Vibrio parahaemolyticus
ACZ33481      6 PGTLFVHAr-KGFGFVSPDNPeeypFDIFVPARD----LRGALDGDHVIVSVlpyprDGQKLKGTISEVL 70  Chlamydophila pneumoniae L...
EGA08747     23 EGVVKATE--KGFGFLEVDAQ----KSYFIPPPQ----MKKVMHGDRIVAVIh---tEKERESAEPEELI 79  Salmonella enterica subsp....
ZP_06534942  63 KGTVIGHR--DGYGFLRVEGRk---DDLYLSSEQ----MKTCIHGDQVLAQPlg-adRKGRREARIVRVL 122 Salmonella enterica subsp....
CAA40595     95 RGTVSAHP--DGFGFLIPEAGg---KDLFLSPRE----MRKVFHGDTILGRAvg-edRRGRIEGAVVRIL 154 Acidithiobacillus ferrooxi...
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