2FBE


Conserved Protein Domain Family
SPRY_PRY_RFPL

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cd15821: SPRY_PRY_RFPL 
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Ret finger protein-like (RFPL), includes RFP1, 2, 3, 4
This domain, consisting of the distinct N-terminal PRY subdomain followed by the SPRY subdomain, is found at the C-terminus of RFPL protein family, which includes RFPL1, RFPL2, RFPL3 and RFPL4. In humans, RFPL transcripts can be detected at the onset of neurogenesis in differentiating human embryonic stem cells, and in the developing human neocortex. The human RFPL1, 2, 3 genes have a role in neocortex development. RFPL1 is a primate-specific target gene of Pax6, a key transcription factor for pancreas, eye and neocortex development; human RFPL1 decreases cell number through its RFPL-defining motif (RDM) and SPRY domains. The RFPL4 (also known as RFPL4A) gene encodes a putative E3 ubiquitin-protein ligase expressed in adult germ cells and interacts with oocyte proteins of the ubiquitin-proteasome degradation pathway.
Statistics
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PSSM-Id: 293993
Aligned: 16 rows
Threshold Bit Score: 269.567
Created: 4-Nov-2014
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2FBE_A         7 EFQVDXTFDVDTANnYLIISEDLRSFRSGd----LSQNRke-qaERFDtaLCVLGTPRFTSGRHYWEVDVGtSQVWDVGV 81  human
XP_007657179 180 RFRVDMTLDVDTANpYLILSEDRRSVRCGtvpwnVPNNP-----ERFYdtPCVLGVPSLTSGVHYWEVEVAgRTQWDLGV 254 platypus
Q8VH31        93 IFQVTMTLDVDTAQnHLIISDDLLSVYYTp----QKQARkk-caERFHpsPCVLGSSRFTSGRHYWEVVVGtSKEWDIGI 167 house mouse
XP_002723431  93 KFQVDVTLDEDTAHnCLVVSKNRKTVHCGfs-plTRRERp----ERFDyaLCVLGSPGFTSGRHYWEVDVGsSREWDVGV 167 rabbit
EGW07515      42 PRSVHMTLDPDTAHdRLIISDDLMSVYCSs----KRQDRke-caERFQvsTCVLGSSRFTSGRHYWELVVGrSKEWDVGV 116 Chinese hamster
XP_001516989  93 RFREDMTLDPSTAHsYLVLSEDLRSVRCG-----FREEPlpntpERYDetACVLGSSRFTHGRHFWEVEVEgKTEWDIGV 167 platypus
ELK18212      93 KFQVQMTLDTDTANkYLVISKDLRQVRCGc----FEQKWra-hsERFNyaVCVLGSSRFTSGRHYWEVEVGtSKEWDVGI 167 black flying fox
ELK23885      93 KFHVDMTLDVDTAHnYLTISEDLQRVRIGd----LPQGRra-hpGRFNdsPCVLGSPRFTSGRHYWEVHVGrSRQWNLGL 167 Myotis davidii
ELW64770     328 RMGLNVALDVDTANnYLIISEDLREVRCRr----FQQARrr-haERFTyaLCVLGSPRFTSGRHYWEVDVGgSREWDVGV 402 Chinese tree shrew
XP_007080675  93 KFQVDVTLDVDTANgYLVISEDLKSVHCGc----SRQNRtp-raERFDyaLCVLGSPGFSSGRHYWEVDVGtSKEWDVGV 167 Amur tiger
2FBE_A        82 CKESVNRQgkIELSSEHGFLTVGCREgkVFAASTvPXTPLWVSPQLHRVGIFLDVGxRSIAFYNVsdGCHIYTFIEIpvC 161 human
XP_007657179 255 CRDSVNRKgkIELSPAAGYWVLSLRDgtQYWACGaHRINLHMVRPPLRVGVFVDVEaGDVTFYNLtdGTYVYTFANGsfR 334 platypus
Q8VH31       168 CKESINRKkaIHLSEKNGFWTVGVRAkkVYSASTdPLTVLRVNPRLRRVGIFLDMLeKSVSFWDLsdGSHIYTFLEIpdT 247 house mouse
XP_002723431 168 CRELANRKgpVELSSEHGFWTLSVRDddVFCASTvPLTHLFLEPRLTRVGVFVDLDtGMVSFCNVadGAHLFTFSKIsvQ 247 rabbit
EGW07515     117 CKDSVNRQepINLTEEHGFWTVGVRGgeVYAACTePLTVLIVNPRLHRVGIFLDLVrKSISFWDLsdGSHIFTFFNIsdT 196 Chinese hamster
XP_001516989 168 TLESGTRKgdITLSPQEGFWAICLRErhHFWASTsPQTPLYLRECPNRVAIFLDIEaGIISFYDVscGSHIFTFSDTf-S 246 platypus
ELK18212     168 CKESVNRQgiILLSSELGFWTVGLRStgIFSASTvPLTVLIINPRLHRVGIFLDMNmGTISFYHVgdGSHIFTFPRIstA 247 black flying fox
ELK23885     168 CRESAPRQgeVVLSAELGFWTVSCKDgnQFIAGTePALGLMVQPRLRRLGLFLDVEmGTFSFYHVadGSHVFTFPAIsaE 247 Myotis davidii
ELW64770     403 CRESVPRQgaVLLSSELGFWTMGVRTggLFSASTvPLTALWVSPQLQRLGVFLDMDmGVLSFFDVrdGSHIFTFTRIaaT 482 Chinese tree shrew
XP_007080675 168 CRDSAHRQgpVLLSSEFGFWTVGLRTd-LFQAGTmPVTVLSVRPRLHRVGVFLDMNfGTVSFYHVsdGSHIFTFTEIpaA 246 Amur tiger
2FBE_A       162 EPWRPFFAHKRgs--qdDQSILSIC 184 human
XP_007657179 335 GPLRPFFCSGIer---eSEATLNIC 356 platypus
Q8VH31       248 DPFRPFFSPASsypdgdQEQVLSIC 272 house mouse
XP_002723431 248 EPLRPFFAPADia--rgDKAFLRVI 270 rabbit
EGW07515     197 DPLRPFFAPANsyp-ddPKEALAIC 220 Chinese hamster
XP_001516989 247 EPLRPFFCVELpdg-geNVAPLTIC 270 platypus
ELK18212     248 EPLRPFFAPANpi--kdDEGFLRIC 270 black flying fox
ELK23885     248 EPLRPFFGPADct--gdDESWLALC 270 Myotis davidii
ELW64770     483 DPLRPFFAPANai--qhDQGSLSIC 505 Chinese tree shrew
XP_007080675 247 ETLRPFFAPGNpt--tdRQEVLRIC 269 Amur tiger
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