1AIR,1PCL


Conserved Protein Domain Family
Pectate_lyase_4

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pfam00544: Pectate_lyase_4 
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Pectate lyase
This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.
Statistics
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PSSM-Id: 366158
Aligned: 7 rows
Threshold Bit Score: 243.654
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1AIR_A           51 PLVITYTGNEDSLINAAAANICGQWSKDPRGVEIKEFTKGitiIGANGSSANfGIWI----KKSSDVVVQNMRIGYL--- 123
WP_013318983     84 PKIIQVTGAIDISGGKAYTSFDDQKARSQISVPSNTTIIG---IGSNGKFTN-GSLVi---KGVSNVILRNLYIETPvdv 156 Dickeya dada...
Q6D727           48 IVVLGASLKAS--------------ALTKVVFGSNKTIVGs--FGGANVLTNiHLRAe---SNSANVIFQNLVFKH---- 104 Pectobacteri...
Q6CZT4           72 PLVITYNGNEDALIKAAEANICGQWSKDPRGVEIKEFTKGitiLGTNGSSANfGIWVv----NSSNVVVRNMRFGYm--- 144 Pectobacteri...
IEC:ABF-0020840  73 PLVITYTGNEDSLINAAAANICGQWSKDARGVEIKEFTKGitiIGANGSSANfGIWIk----KSSDVVVQNMRIGYl--- 145
P0C1A3           85 AKIIQITGTVDISGGTPYKDFADQKARSQINIPANTTVIG---IGTDAKFIN-GSLIidgtDGTNNVIIRNVYIQTPidv 160 Dickeya dada...
1PCL_A           47 AKIIKVTGPIDISGGKAYTSFDDQKARSQISIPSNTTIIG---VGSNGKFTN-GSLVi---KGVKNVILRNLYIETPvdv 119
1AIR_A          124 -------PGGAKDGDMIRVD-DSP-NVWVDHNELFAANHECDGTPDN----DTTFESAVDIKGASNTVTVSYNYIHGVKK 190
WP_013318983    157 aphyeegDGWNAEWDAAVID-NST-RVWVDHVTISDGSFTDDKYTTKdgekYVQHDGALDIKKGSDYVTISSSRFELHDK 234 Dickeya dada...
Q6D727          105 -------DVSIKDNDDIQLYlNYGkGYWVDHCSWPGHTWSDSDGS---------LDKLIYIGEKADYVTISNCLFSNHKY 168 Pectobacteri...
Q6CZT4          145 -------PGGAKDGDAIRID-NSP-NVWIDHNEIFAKNFECAGTPDN----DTTFESAVDIKKASTNVTVSYNFIHGVKK 211 Pectobacteri...
IEC:ABF-0020840 146 -------PGGAKDGDMVRVD-DSP-NVWVDHNELFAANHECDGTPDG----DTTFEAAVDIKGASDYVTVSYNYIHGVKK 212
P0C1A3          161 ephyekgDGWNAEWDGMNIT-NGAhHVWVDHVTISDGSFTDDMYTTKdgetYVQHDGALDIKRGSDYVTISNSLFDQHDK 239 Dickeya dada...
1PCL_A          120 aphyesgDGWNAEWDAAVID-NST-NVWVDHVTISDGSFTDDKYTTKdgekYVQHDGALDIKKGSDYVTISYSRFELHDK 197
1AIR_A          191 VGLDGS-S----SSDTG-RNITYHHNYYNDVNARLP-LQRGGLVHAYNNLY-------TNITGSGLNVRQNGQALIENNW 256
WP_013318983    235 TILIGH-SdsngSQDSGkLRVTFHNNVFDRVTERTP-RVRFGSIHAYNNVYlgdvknsVYPYLYSFGLGTSGSILSESNS 312 Dickeya dada...
Q6D727          169 GCIFGHpAddnnSAYNGyPRLTICHNYYENIQVRAPgLMRYGYFHVFNN-Y-------VNKFNLAFTVAQNANVLSERNV 240 Pectobacteri...
Q6CZT4          212 VGLSGS-S----NTDTG-RNLTYHHNIYSDVNSRLP-LQRGGQVHAYNNLY-------DGIKSSGFNVRQKGIALIESNW 277 Pectobacteri...
IEC:ABF-0020840 213 VGLDGS-S----NSDTG-RNITYHHNRYNDVNARLP-LQRGGLVHAYNNLY-------SNVTSSGLNVRQNGQALIESNW 278
P0C1A3          240 TMLIGH-SdtnsAQDKGkLHVTLFNNVFNRVTERAP-RVRYGSIHSFNNVFngdvkdpVYRYLYSFGIGTSGSVLSEGNS 317 Dickeya dada...
1PCL_A          198 TILIGH-SdsngSQDSGkLRVTFHNNVFDRVTERAP-RVRFGSIHAYNNVYlgdvkhsVYPYLYSFGLGTSGSILSESNS 275
1AIR_A          257 F 257
WP_013318983    313 F 313 Dickeya dadantii
Q6D727          241 F 241 Pectobacterium atrosepticum
Q6CZT4          278 F 278 Pectobacterium atrosepticum SCRI1043
IEC:ABF-0020840 279 F 279
P0C1A3          318 F 318 Dickeya dadantii 3937
1PCL_A          276 F 276
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