1RJJ,1Q53,3BGU,3BB5,3BN7,3BDE,2QYC


Conserved Protein Domain Family
Dabb

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smart00886: Dabb 
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Stress responsive A/B Barrel Domain
The function of this domain is unknown, but it is upregulated in response to salt stress in Populus balsamifera (balsam poplar). It is also found at the C-terminus of a fructose 1,6-bisphosphate aldolase from Hydrogenophilus thermoluteolus.It is found in the pA01 plasmid, which encodes genes for molybdopterin uptake and degradation of plant alkaloid nicotine. The structure of one has been solved and the domain forms an alpha-beta barrel dimer. Although there is a clear duplication within the domain it is not obviously detectable in the sequence.
Statistics
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PSSM-Id: 214884
Aligned: 126 rows
Threshold Bit Score: 53.0599
Created: 13-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1RJJ_A         6 FKHLVVVKFKEDT---K-------VDEILKGLE-----NLVSqiDTVKSFEWGEDkESHDMLRQGFTHAFSMTFEN-KDG 69  thale cress
YP_298462     98 IWRTLMFRVRPQAseqH-------VRALERDLL-----RMPDymPGILNWRLARV-----ASADTWTHVWQQEFAS-VND 159 Ralstonia eutro...
YP_001135811 105 VYRTLLLRVLPGTepsV-------VARFEDELR-----LMPRyvRSITAWQLSRA-QDPTG-DAGWTHVFEQQFTD-EAG 169 Mycobacterium g...
YP_887206     97 VYRTLLLRVAPGTdpdA-------VARFEAELA-----AMPRhvGTILSWQLS-Q-VTEAVGDTTWTHVFEQEFTD-VAG 161 Mycobacterium s...
YP_882213     99 VYRTLLLAVSPDTaedT-------VARFEADLR-----LMPRyvRTITGWQLSRV-EEATGASA-WTHVFEQLFTD-VDG 163 Mycobacterium a...
YP_119578    153 VYRTLLLRVDPAAgpgQ-------VSRFEHGTL-----QMPVhiPAISAWQLSPV-RHAVGTAQ-WTHVWEQEFTD-VDG 217 Nocardia farcin...
YP_953697    100 VYRTLLLSVAPDTgadV-------LSRFEADLQ-----RLPGyvSTISAWQLSRP--DHTVGATPWTHVFEQEFSD-SDG 164 Mycobacterium v...
XP_964569     10 IHRMTLFKIPDETnqkRlldayhvVAEEQKKLA-----SQKDgkPYILQLTAGKT-L-PDQKARGYTVASYIEFAS-MDD 81  Neurospora cras...
XP_751765      4 IERITLFNVPKa---eD-------RARILEQYKilaktALKDgkPYILSAAAGE--SFPDPRNKGFNISVKTTFAS-LED 70  Aspergillus fum...
YP_702254    103 VYRTLFVAVDDSVdpaV-------VERFESETR-----AMPNhiRTIGTSQLSRV--RESSGSARWTHVWEQEYANlDGL 168 Rhodococcus sp....
1RJJ_A        70 -Y-VAFTSHP-LHVEFSA-AFTA---ViDKIVLLDF 98  thale cress
YP_298462    160 lL-GEYLMHPfHWGWVDR-WFDPa--CpDWTVeais 191 Ralstonia eutropha JMP134
YP_001135811 170 lM-GPYLMHP-IHWAVVD-RWFDp--EtTDVIIRDR 200 Mycobacterium gilvum PYR-GCK
YP_887206    162 lM-GPYLMHP-IHWAVVD-RWFDp--EtTDVIIRDR 192 Mycobacterium smegmatis str. MC2 155
YP_882213    164 lM-GPYLMHP-IHWAVVD-RWFDp--EcPDVIVRDR 194 Mycobacterium avium 104
YP_119578    218 -LlGAYMRHPiHWAHVDR-FFDPe--CpEWIVkdri 249 Nocardia farcinica IFM 10152
YP_953697    165 iM-GPYLMHP-IHWAVVDqWFDPe--CpNSIVrerv 196 Mycobacterium vanbaalenii PYR-1
XP_964569     82 -M-RYYDNEClAHAMLKE--IGPslnLsEPPTILCF 113 Neurospora crassa OR74A
XP_751765     71 -M-EYYDKECeAHKALRA-VA-Gp--VkEDVLTTYF 100 Aspergillus fumigatus Af293
YP_702254    169 -L-GPYMTHPyHWAHIDR-WFDPe--RgPR-IVT-R 197 Rhodococcus sp. RHA1
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