NM_000059.4(BRCA2):c.1813dup (p.Ile605fs) AND Breast-ovarian cancer, familial, susceptibility to, 2
- Germline classification:
- Pathogenic (18 submissions)
- Last evaluated:
- Apr 22, 2016
- Review status:
- 3 stars out of maximum of 4 starsreviewed by expert panel
- Somatic classification
of clinical impact: - None
- Review status:
- (0/4) 0 stars out of maximum of 4 starsno assertion criteria provided
- Somatic classification
of oncogenicity: - None
- Review status:
- (0/4) 0 stars out of maximum of 4 starsno assertion criteria provided
- Record status:
- current
- Accession:
- RCV000031343.41
Allele description [Variation Report for NM_000059.4(BRCA2):c.1813dup (p.Ile605fs)]
NM_000059.4(BRCA2):c.1813dup (p.Ile605fs)
- Gene:
- BRCA2:BRCA2 DNA repair associated [Gene - OMIM - HGNC]
- Variant type:
- Duplication
- Cytogenetic location:
- 13q13.1
- Genomic location:
- Preferred name:
- NM_000059.4(BRCA2):c.1813dup (p.Ile605fs)
- Other names:
- 2034insA; 2041_2042insA; p.Ile605AsnfsX11
- HGVS:
- NC_000013.11:g.32333291dup
- NG_012772.3:g.22812dup
- NM_000059.4:c.1813dupMANE SELECT
- NP_000050.3:p.Ile605fs
- LRG_293:g.22812dup
- NC_000013.10:g.32907420_32907421insA
- NC_000013.10:g.32907428dup
- NM_000059.3:c.1806dupA
- NM_000059.3:c.1813dupA
- NM_000059.4:c.1813dupA
- U43746.1:n.2034_2035insA
- U43746.1:n.2041_2042insA
- p.I605NFS*11
- p.I605NfsX11
- p.Ile605Asnfs*11
This HGVS expression did not pass validation- Nucleotide change:
- 2040insA
- Protein change:
- I605fs
- Links:
- Breast Cancer Information Core (BIC) (BRCA2): 2034&base_change=ins A; Breast Cancer Information Core (BIC) (BRCA2): 2041&base_change=ins A; dbSNP: rs80359306
- NCBI 1000 Genomes Browser:
- rs80359306
- Molecular consequence:
- NM_000059.4:c.1813dup - frameshift variant - [Sequence Ontology: SO:0001589]
- Functional consequence:
- loss_of_function_variant [Sequence Ontology: SO:0002054]
- Observations:
- 171
Condition(s)
-
Saccharomyces cerevisiae S288C nucleotide diphosphatase (YOR111W), partial mRNA
Saccharomyces cerevisiae S288C nucleotide diphosphatase (YOR111W), partial mRNAgi|398365158|ref|NM_001183530.3|Nucleotide
-
cullin RTT101 [Saccharomyces cerevisiae S288C]
cullin RTT101 [Saccharomyces cerevisiae S288C]gi|398364539|ref|NP_012488.3|Protein
-
envelope glycoprotein [Mus musculus castaneus]
envelope glycoprotein [Mus musculus castaneus]gi|63004251|gb|AAY25516.1|Protein
-
Homo sapiens zinc finger DHHC-type palmitoyltransferase 23 (ZDHHC23), transcript...
Homo sapiens zinc finger DHHC-type palmitoyltransferase 23 (ZDHHC23), transcript variant 6, mRNAgi|1394533635|ref|NM_001363952.1|Nucleotide
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See more...Assertion and evidence details
Submission Accession | Submitter | Review Status (Assertion method) | Clinical Significance (Last evaluated) | Origin | Method | Citations |
---|---|---|---|---|---|---|
SCV000053947 | Sharing Clinical Reports Project (SCRP) | no assertion criteria provided | Pathogenic (Oct 11, 2013) | germline | clinical testing | |
SCV000145951 | Breast Cancer Information Core (BIC) (BRCA2) | no assertion criteria provided | Pathogenic (May 29, 2002) | germline, somatic | clinical testing | |
SCV000195964 | Michigan Medical Genetics Laboratories, University of Michigan | criteria provided, single submitter (ACMG Guidelines, 2015) | Pathogenic (Nov 3, 2014) | germline | clinical testing | |
SCV000212013 | Institute of Human Genetics, Medical University Innsbruck - BRCA-Tyrol | no assertion criteria provided (clinical testing) | Pathogenic (Feb 11, 2015) | germline | clinical testing | |
SCV000220297 | Counsyl | criteria provided, single submitter (Counsyl Autosomal Dominant Disease Classification criteria (2015)) | Pathogenic (May 8, 2014) | unknown | literature only | PubMed (7) Counsyl Autosomal Dominant Disease Classification criteria (2015), |
SCV000282363 | Evidence-based Network for the Interpretation of Germline Mutant Alleles (ENIGMA) | reviewed by expert panel (ENIGMA BRCA1/2 Classification Criteria (2015)) | Pathogenic (Apr 22, 2016) | germline | curation | ENIGMA BRCA1/2 Classification Criteria (2015), |
SCV000326619 | Consortium of Investigators of Modifiers of BRCA1/2 (CIMBA), c/o University of Cambridge | criteria provided, single submitter (CIMBA Mutation Classification guidelines May 2016) | Pathogenic (Oct 2, 2015) | germline | clinical testing | CIMBA_Mutation_Classification_guidelines_May16.pdf, |
SCV000577948 | Genologica Medica
| criteria provided, single submitter (ACMG Guidelines, 2015) | Pathogenic (Jan 1, 2017) | germline | clinical testing | |
SCV000746277 | Genomic Research Center, Shahid Beheshti University of Medical Sciences | criteria provided, single submitter (ACMG Guidelines, 2015) | Pathogenic (Dec 3, 2017) | inherited | clinical testing | |
SCV000839914 | Human Genome Sequencing Center Clinical Lab, Baylor College of Medicine | criteria provided, single submitter (ACMG Guidelines, 2015) | Pathogenic (May 25, 2017) | germline | clinical testing | |
SCV001428710 | Institute of Human Genetics, University of Leipzig Medical Center | criteria provided, single submitter (ACMG Guidelines, 2015) | Pathogenic (Oct 27, 2023) | unknown | clinical testing | |
SCV002104297 | University of Science and Technology Houari Boumediene, Laboratory of Molecular and Cellular Biology (LBCM) | criteria provided, single submitter (ACMG Guidelines, 2015) | Pathogenic | germline | clinical testing | |
SCV002579911 | MGZ Medical Genetics Center | criteria provided, single submitter (ACMG Guidelines, 2015) | Pathogenic (May 2, 2022) | germline | clinical testing | |
SCV002588853 | BRCAlab, Lund University | no assertion criteria provided | Pathogenic (Aug 26, 2022) | germline | clinical testing | |
SCV004099179 | Greenwood Genetic Center Diagnostic Laboratories, Greenwood Genetic Center | criteria provided, single submitter (ACMG Guidelines, 2015) | Pathogenic (Sep 27, 2023) | germline | clinical testing | |
SCV004846973 | All of Us Research Program, National Institutes of Health | criteria provided, single submitter (ACMG Guidelines, 2015) | Pathogenic (Feb 5, 2024) | germline | clinical testing | |
SCV005061313 | Molecular Oncology, Hospital Universitario Central de Asturias (HUCA) | no assertion criteria provided | Pathogenic (May 24, 2021) | germline | case-control | |
SCV005093814 | Department of Human Genetics, Hannover Medical School | criteria provided, single submitter (ACMG Guidelines, 2015) | Pathogenic (Aug 5, 2024) | germline | clinical testing |
Summary from all submissions
Ethnicity | Origin | Affected | Individuals | Families | Chromosomes tested | Number Tested | Family history | Method |
---|---|---|---|---|---|---|---|---|
not provided | germline | yes | 39 | 2 | not provided | not provided | not provided | clinical testing, case-control |
not provided | germline | not provided | 38 | not provided | not provided | 38 | not provided | clinical testing |
not provided | germline | unknown | 2 | 167 | not provided | 108544 | not provided | clinical testing, curation |
not provided | inherited | yes | not provided | not provided | not provided | not provided | not provided | clinical testing |
not provided | somatic | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
not provided | unknown | yes | not provided | not provided | not provided | not provided | not provided | clinical testing |
not provided | unknown | unknown | not provided | not provided | not provided | not provided | not provided | literature only |
Ashkenazi, Western European | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Caucasian | germline | yes | 2 | not provided | not provided | not provided | not provided | clinical testing |
Caucasian Non Hispanic | germline | yes | 2 | not provided | not provided | not provided | not provided | clinical testing |
Causasians | germline | yes | not provided | 2 | not provided | not provided | yes | clinical testing |
Central/Eastern European | germline | yes | 2 | not provided | not provided | not provided | not provided | clinical testing |
Latin American, Caribbean | germline | yes | 2 | not provided | not provided | not provided | not provided | clinical testing |
Native American | germline | yes | 2 | not provided | not provided | not provided | not provided | clinical testing |
Near Eastern | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Western European | germline | yes | 29 | not provided | not provided | not provided | not provided | clinical testing |
Western European, Central/Eastern European | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Western European, German, Cyech | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Western Europeanan, Central/Eastern European | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Western, Central/Eastern European | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Citations
PubMed
Heidemann S, Fischer C, Engel C, Fischer B, Harder L, Schlegelberger B, Niederacher D, Goecke TO, Doelken SC, Dikow N, Jonat W, Morlot S, Schmutzler RC, Arnold NK.
Breast Cancer Res Treat. 2012 Aug;134(3):1229-39. doi: 10.1007/s10549-012-2050-4. Epub 2012 Apr 26.
- PMID:
- 22535016
Foretova L, Machackova E, Navratilova M, Pavlu H, Hruba M, Lukesova M, Valik D.
Hum Mutat. 2004 Apr;23(4):397-8.
- PMID:
- 15024741
Details of each submission
From Sharing Clinical Reports Project (SCRP), SCV000053947.5
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | clinical testing | not provided |
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | not provided | 38 | not provided | not provided | not provided | not provided | not provided | not provided |
From Breast Cancer Information Core (BIC) (BRCA2), SCV000145951.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | 27 | not provided | not provided | clinical testing | PubMed (1) |
2 | not provided | 1 | not provided | not provided | clinical testing | PubMed (1) |
3 | not provided | 2 | not provided | not provided | clinical testing | PubMed (1) |
4 | not provided | 1 | not provided | not provided | clinical testing | PubMed (1) |
5 | not provided | 1 | not provided | not provided | clinical testing | PubMed (1) |
6 | Ashkenazi, Western European | 1 | not provided | not provided | clinical testing | PubMed (1) |
7 | Caucasian | 1 | not provided | not provided | clinical testing | PubMed (1) |
8 | Caucasian | 1 | not provided | not provided | clinical testing | PubMed (1) |
9 | Caucasian Non Hispanic | 2 | not provided | not provided | clinical testing | PubMed (1) |
10 | Central/Eastern European | 2 | not provided | not provided | clinical testing | PubMed (1) |
11 | Latin American, Caribbean | 2 | not provided | not provided | clinical testing | PubMed (1) |
12 | Native American | 2 | not provided | not provided | clinical testing | PubMed (1) |
13 | Near Eastern | 1 | not provided | not provided | clinical testing | PubMed (1) |
14 | Western European | 29 | not provided | not provided | clinical testing | PubMed (1) |
15 | Western European, Central/Eastern European | 1 | not provided | not provided | clinical testing | PubMed (1) |
16 | Western European, German, Cyech | 1 | not provided | not provided | clinical testing | PubMed (1) |
17 | Western Europeanan, Central/Eastern European | 1 | not provided | not provided | clinical testing | PubMed (1) |
18 | Western, Central/Eastern European | 1 | not provided | not provided | clinical testing | PubMed (1) |
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | yes | not provided | not provided | not provided | 27 | not provided | not provided | not provided | |
2 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
3 | germline | yes | not provided | not provided | not provided | 2 | not provided | not provided | not provided | |
4 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
5 | somatic | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
6 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
7 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
8 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
9 | germline | yes | not provided | not provided | not provided | 2 | not provided | not provided | not provided | |
10 | germline | yes | not provided | not provided | not provided | 2 | not provided | not provided | not provided | |
11 | germline | yes | not provided | not provided | not provided | 2 | not provided | not provided | not provided | |
12 | germline | yes | not provided | not provided | not provided | 2 | not provided | not provided | not provided | |
13 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
14 | germline | yes | not provided | not provided | not provided | 29 | not provided | not provided | not provided | |
15 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
16 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
17 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
18 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided |
From Michigan Medical Genetics Laboratories, University of Michigan, SCV000195964.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | clinical testing | PubMed (1) |
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | yes | not provided | Blood | not provided | not provided | not provided | not provided | not provided |
From Institute of Human Genetics, Medical University Innsbruck - BRCA-Tyrol, SCV000212013.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | clinical testing | not provided |
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | yes | not provided | not provided | not provided | not provided | not provided | not provided | not provided |
From Counsyl, SCV000220297.2
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | literature only | PubMed (7) |
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | unknown | unknown | not provided | not provided | not provided | not provided | not provided | not provided | not provided |
From Evidence-based Network for the Interpretation of Germline Mutant Alleles (ENIGMA), SCV000282363.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | curation | not provided |
Description
Variant allele predicted to encode a truncated non-functional protein.
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | unknown | not provided | not provided | not provided | not provided | not provided | not provided | not provided |
From Consortium of Investigators of Modifiers of BRCA1/2 (CIMBA), c/o University of Cambridge, SCV000326619.4
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | clinical testing | not provided |
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | unknown | not provided | not provided | not provided | not provided | not provided | 167 | not provided |
From Genologica Medica, SCV000577948.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | Causasians | not provided | not provided | yes | clinical testing | PubMed (1) |
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | yes | not provided | Blood | not provided | not provided | not provided | 2 | not provided |
From Genomic Research Center, Shahid Beheshti University of Medical Sciences, SCV000746277.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | clinical testing | PubMed (1) |
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | inherited | yes | not provided | not provided | not provided | not provided | not provided | not provided | not provided |
From Human Genome Sequencing Center Clinical Lab, Baylor College of Medicine, SCV000839914.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | clinical testing | PubMed (1) |
Description
The c.1813dup (p.Ile605Asnfs*11) variant in the BRCA2 gene has been detected in multiple patients with breast and/or ovarian cancer [referred as 2034insA and 2041insA in PMID 9150150, 21324516, 22535016] and prostate cancer [PMID 21952622].This variant has been reported in four individuals from the ExAC database (http://exac.broadinstitute.org/variant/22-29091226-TA-T). This one bp duplication in exon 10 results in a frameshift and the creation of a premature stop codon. This variant is expected to result in a loss of function of the protein. It is thus classified as pathogenic.
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | unknown | not provided | not provided | not provided | not provided | not provided | not provided | not provided |
From Institute of Human Genetics, University of Leipzig Medical Center, SCV001428710.4
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | clinical testing | PubMed (1) |
Description
Criteria applied: PVS1,PM5_STR
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | unknown | yes | not provided | not provided | not provided | not provided | not provided | not provided | not provided |
From University of Science and Technology Houari Boumediene, Laboratory of Molecular and Cellular Biology (LBCM), SCV002104297.2
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | 1 | not provided | not provided | clinical testing | PubMed (2) |
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided |
From MGZ Medical Genetics Center, SCV002579911.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | 7 | not provided | not provided | clinical testing | PubMed (1) |
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | yes | not provided | not provided | not provided | 7 | not provided | not provided | not provided |
From BRCAlab, Lund University, SCV002588853.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | clinical testing | not provided |
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | yes | not provided | not provided | not provided | not provided | not provided | 2 | not provided |
From Greenwood Genetic Center Diagnostic Laboratories, Greenwood Genetic Center, SCV004099179.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | clinical testing | PubMed (1) |
Description
PVS1, PM2, PS4
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | unknown | not provided | not provided | not provided | not provided | not provided | not provided | not provided |
From All of Us Research Program, National Institutes of Health, SCV004846973.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | 2 | not provided | not provided | clinical testing | PubMed (19) |
Description
This variant inserts 1 nucleotide in exon 10 of the BRCA2 gene, creating a frameshift and premature translation stop signal. This variant is also known as 2034insA, 2040insA, 2041insA, 2041dupA, 2041_2042insA, c.1813insA and c.1806dupA in the literature. This variant is expected to result in an absent or non-functional protein product. This variant has been reported in a breast cancer case-control meta-analysis in 20 cases and 1 unaffected control, which is estimated to have an odds ratio for pathogenicity of OR=17.689 (95%CI 2.374 to 131.809; p-value<0.001) (PMID: 33471991; Leiden Open Variation Database DB-ID BRCA2_001802) and also has been reported in individuals affected with breast, ovarian, pancreatic, prostate and neuroendocrine cancers (PMID: 9150150, 9667259, 18042939, 20104584, 21324516, 21952622, 22729890, 25072261, 28724667, 29433453) and suspected hereditary breast and ovarian cancer families (PMID: 11802209, 21232165, 24156927). In one family, this variant was reported in 11 women affected with breast cancer across three generations (PMID: 9150150). This variant also has been detected in two compound heterozygous individuals with a second pathogenic BRCA2 mutation who exhibited clinical features consistent with Fanconi anemia (PMID: 15070707, 21548014). Haplotype analysis suggests that this variant may be a founder mutation and is common in people of German ancestry (PMID: 9585613, 23199084). This variant has been identified in 3/232106 chromosomes in the general population by the Genome Aggregation Database (gnomAD). Loss of BRCA2 function is a known mechanism of disease (clinicalgenome.org). Based on the available evidence, this variant is classified as Pathogenic.
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | unknown | 108544 | not provided | not provided | 2 | not provided | not provided | not provided |
From Molecular Oncology, Hospital Universitario Central de Asturias (HUCA), SCV005061313.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | case-control | PubMed (1) |
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | yes | not provided | not provided | not provided | not provided | not provided | 3 | not provided |
From Department of Human Genetics, Hannover Medical School, SCV005093814.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | clinical testing | PubMed (1) |
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | yes | not provided | not provided | not provided | not provided | not provided | not provided | not provided |
Last Updated: Nov 3, 2024