| | | Deletion (stop lost) | Rett syndrome | |
| | | Indel (nonsense) | Rett syndrome | |
| | | Deletion (frameshift variant) | Rett syndrome | |
| | | Deletion (frameshift variant) | Rett syndrome | |
| | | Deletion (frameshift variant) | Rett syndrome +3 more | |
| | | Single nucleotide variant (missense variant) | not provided +4 more | |
| | | Single nucleotide variant (synonymous variant) | Inborn genetic diseases +4 more | |
| | | Single nucleotide variant (missense variant) | Rett syndrome | |
| | | Single nucleotide variant (synonymous variant) | Rett syndrome +4 more | |
| | | Single nucleotide variant (nonsense) | Autism, susceptibility to, X-linked 3 +8 more | |
| | | Deletion (frameshift variant) | Rett syndrome | |
| | | Duplication (frameshift variant) | Rett syndrome +2 more | GPathogenic/Likely pathogenic |
| | | Single nucleotide variant (missense variant +1 more) | Rett syndrome +1 more | |
| | | Single nucleotide variant (missense variant +1 more) | X-linked intellectual disability-psychosis-macroorchidism syndrome +9 more | GPathogenic/Likely pathogenic |
| | | Single nucleotide variant (missense variant +1 more) | Severe neonatal-onset encephalopathy with microcephaly +2 more | |
| | | Single nucleotide variant (missense variant +1 more) | Rett syndrome | |
| | | Single nucleotide variant (missense variant +1 more) | Rett syndrome | |
| | | Deletion (frameshift variant +1 more) | Rett syndrome | |
| | | Single nucleotide variant (intron variant) | Rett syndrome | |
| | | Single nucleotide variant (intron variant) | not specified +1 more | |
| | | Single nucleotide variant (5 prime UTR variant +3 more) | Rett syndrome | |
| | | Microsatellite (splice donor variant) | Rett syndrome +2 more | GPathogenic/Likely pathogenic |
| | | Single nucleotide variant (missense variant +1 more) | Severe neonatal-onset encephalopathy with microcephaly +1 more | GPathogenic/Likely pathogenic |