NAP1L3[gene] - ClinVar - NCBI

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	Variation	Gene (Protein Change)	Type (Consequence)	Condition	Classification, Review status
Select item 488014	Single allele	ARMCX3, CT47A11 +2631 more	Duplication	Autism +1 more	GPathogenic
Select item 146764	GRCh38/hg38 Xp22.33-q28(chrX:10001-156030895)x1	VAMP7, VBP1 +2633 more	Copy number loss	See cases	GPathogenic
Select item 160983	GRCh38/hg38 Xp22.33-q28(chrX:10679-156013167)x1	ABCB7, ABCD1 +2632 more	Copy number loss	See cases	GPathogenic
Select item 160897	GRCh38/hg38 Xp22.33-q28(chrX:10679-156022206)x3	LOC130068116, LOC130068117 +2633 more	Copy number gain	See cases	GPathogenic
Select item 160890	GRCh38/hg38 Xp22.33-q28(chrX:10679-156022206)x1	NAA10, NALF2 +2633 more	Copy number loss	See cases	GPathogenic
Select item 144172	GRCh38/hg38 Xp22.33-q28(chrX:10679-156022826)x4	LOC130068159, LOC130068160 +2633 more	Copy number gain	See cases	GPathogenic
Select item 57087	GRCh38/hg38 Xp22.33-q28(chrX:10679-156022206)x1	LOC111365170, LOC111365174 +2633 more	Copy number loss	See cases	GPathogenic
Select item 57086	GRCh38/hg38 Xp22.33-q28(chrX:10679-156022206)x3	LOC110120679, LOC110120680 +2633 more	Copy number gain	See cases	GPathogenic
Select item 154558	GRCh38/hg38 Xp22.33-q28(chrX:10701-156003229)x3	ITGB1BP2, ITIH6 +2632 more	Copy number gain	See cases	GPathogenic
Select item 148821	GRCh38/hg38 Xp22.33-q22.3(chrX:10701-106113403)x1	ABCB7, ACE2 +1628 more	Copy number loss	See cases	GPathogenic
Select item 146861	GRCh38/hg38 Xp22.33-q28(chrX:10701-156003229)x1	LOC130068277, LOC130068278 +2632 more	Copy number loss	See cases	GPathogenic
Select item 146857	GRCh38/hg38 Xp22.33-q25(chrX:10701-128393708)	ABCB7, ACE2 +1932 more	Copy number loss	See cases	GPathogenic
Select item 144465	GRCh38/hg38 Xp22.33-q28(chrX:10701-156003242)x1	LOC126863344, LOC126863345 +2632 more	Copy number loss	See cases	GPathogenic
Select item 144429	GRCh38/hg38 Xp22.33-q28(chrX:10701-156003242)x3	AP1S2, APEX2 +2632 more	Copy number gain	See cases	GPathogenic
Select item 144310	GRCh38/hg38 Xp22.33-q28(chrX:10701-155978689)x1	ABCB7, ABCD1 +2631 more	Copy number loss	See cases	GPathogenic
Select item 161089	GRCh38/hg38 Xp22.33-q28(chrX:14245-155999293)x1	LOC130068156, LOC130068157 +2632 more	Copy number loss	See cases	GPathogenic
Select item 57161	GRCh38/hg38 Xp22.33-q28(chrX:20140-155699618)x1	LOC125467792, LOC125467793 +2628 more	Copy number loss	See cases	GPathogenic
Select item 57160	GRCh38/hg38 Xp22.33-q28(chrX:20140-155699618)x3	ABCB7, ABCD1 +2628 more	Copy number gain	See cases	GPathogenic
Select item 152900	GRCh38/hg38 Xp22.33-q28(chrX:20297-156016920)x3	ABCB7, ABCD1 +2633 more	Copy number gain	See cases	GPathogenic
Select item 145995	GRCh38/hg38 Xp22.33-q28(chrX:20297-156026127)x1	VCX3B, VEGFD +2633 more	Copy number loss	See cases	GPathogenic
Select item 145162	GRCh38/hg38 Xp22.33-q28(chrX:20297-155999253)x3	CENPVL1, CENPVL2 +2632 more	Copy number gain	See cases	GPathogenic
Select item 58553	GRCh38/hg38 Xp22.33-q28(chrX:26101-155999293)x3	CT47A6, CT47A7 +2632 more	Copy number gain	See cases	GPathogenic
Select item 161091	GRCh38/hg38 Xp22.33-q28(chrX:26102-155996431)x3	LOC116309160, LOC116309161 +2631 more	Copy number gain	See cases	GPathogenic
Select item 161088	GRCh38/hg38 Xp22.33-q28(chrX:26102-155996431)x1	ABCB7, ABCD1 +2631 more	Copy number loss	See cases	GPathogenic
Select item 58555	GRCh38/hg38 Xp22.33-q28(chrX:27245-155996431)x3	CTPS2, CUL4B +2631 more	Copy number gain	See cases	GPathogenic
Select item 147257	GRCh38/hg38 Xp22.33-q28(chrX:40904-155998166)x1	LOC130068611, LOC130068612 +2632 more	Copy number loss	See cases	GPathogenic
Select item 155374	GRCh38/hg38 Xp22.33-q28(chrX:251879-156004066)x1	LOC130068404, LOC130068405 +2632 more	Copy number loss	See cases	GPathogenic
Select item 155366	GRCh38/hg38 Xp22.33-q28(chrX:251879-156004066)x3	GPR101, GPR119 +2632 more	Copy number gain	See cases	GPathogenic
Select item 153937	GRCh38/hg38 Xp22.33-q24(chrX:251879-118847157)x3	ABCB7, ACE2 +1798 more	Copy number gain	See cases	GPathogenic
Select item 155152	GRCh38/hg38 Xp22.33-q28(chrX:251880-156004066)x3	LOC109396974, LOC109504725 +2632 more	Copy number gain	See cases	GPathogenic
Select item 152158	GRCh38/hg38 Xp22.33-q28(chrX:251880-156004066)x1	WDR13, WDR44 +2632 more	Copy number loss	See cases	Gconflicting data from submitters
Select item 152157	GRCh38/hg38 Xp22.33-q28(chrX:251880-156004066)x4	ABCB7, ABCD1 +2632 more	Copy number gain	See cases	GPathogenic
Select item 151130	GRCh38/hg38 Xp22.33-q28(chrX:251880-156004181)x3	LINC00629, LINC00630 +2632 more	Copy number gain	See cases	GPathogenic
Select item 59200	GRCh38/hg38 Xp22.33-q22.1(chrX:675360-100368517)x1	MIR1321, MIR1468 +1493 more	Copy number loss	See cases	GPathogenic
Select item 150422	GRCh38/hg38 Xp22.33-q28(chrX:1085618-155699644)x1	TSR2, TXLNG +2611 more	Copy number loss	See cases	GPathogenic
Select item 152899	GRCh38/hg38 Xp22.33-q28(chrX:2299223-155992188)x3	DMRTC1, DMRTC1B +2603 more	Copy number gain	See cases	GPathogenic
Select item 147627	GRCh38/hg38 Xp22.33-q28(chrX:2765636-155522304)x3	DLG3, DLG3-AS1 +2593 more	Copy number gain	See cases	GPathogenic
Select item 147683	GRCh38/hg38 Xp22.33-q28(chrX:2782275-155611794)x2	LOC116309156, LOC116309157 +2593 more	Copy number gain	See cases	GPathogenic
Select item 58586	GRCh38/hg38 Xp22.33-q28(chrX:2790845-155699618)x3	LOC130068344, LOC130068345 +2595 more	Copy number gain	See cases	GPathogenic
Select item 57225	GRCh38/hg38 Xp22.33-q28(chrX:3092486-155699618)x2	LOC129391311, LOC129391312 +2585 more	Copy number gain	See cases	GPathogenic
Select item 149705	GRCh38/hg38 Xp22.2-q27.3(chrX:13020141-143473520)x1	SYTL4, SYTL5 +2046 more	Copy number loss	See cases	GPathogenic
Select item 146240	GRCh38/hg38 Xp21.1-q28(chrX:36237706-156022206)x1	ABCB7, ABCD1 +2102 more	Copy number loss	See cases	GPathogenic
Select item 145974	GRCh38/hg38 Xp21.1-q28(chrX:37076284-156016920)x1	ABCB7, ABCD1 +2098 more	Copy number loss	See cases	GPathogenic
Select item 148340	GRCh38/hg38 Xp11.23-q22.1(chrX:49100536-102174742)x1	LOC130068430, LOC130068431 +640 more	Copy number loss	See cases	GPathogenic
Select item 153303	GRCh38/hg38 Xp11.22-q24(chrX:50289384-119297604)	LOC130068386, LOC130068387 +824 more	Copy number loss	See cases	GPathogenic
Select item 155282	GRCh38/hg38 Xp11.22-q28(chrX:53144751-156003242)x1	ABCB7, ABCD1 +1590 more	Copy number loss	See cases	GPathogenic
Select item 57923	GRCh38/hg38 Xp11.21-q28(chrX:57372584-155996431)x1	ABCB7, ABCD1 +1476 more	Copy number loss	See cases	GPathogenic
Select item 148479	GRCh38/hg38 Xq11.1-28(chrX:62561604-156003242)x3	LOC126863296, LOC126863297 +1467 more	Copy number gain	See cases	GPathogenic
Select item 150589	GRCh38/hg38 Xq11.1-28(chrX:62712219-156003242)x3	ABCB7, ABCD1 +1467 more	Copy number gain	See cases	GPathogenic
Select item 144543	GRCh38/hg38 Xq11.1-28(chrX:62712230-155978888)x3	ABCB7, ABCD1 +1466 more	Copy number gain	See cases	GPathogenic
Select item 57924	GRCh38/hg38 Xq11.1-28(chrX:63279794-155939524)x1	LOC130068371, LOC130068372 +1464 more	Copy number loss	See cases	GPathogenic
Select item 145624	GRCh38/hg38 Xq13.2-28(chrX:74510116-156022206)x1	ABCB7, ABCD1 +1254 more	Copy number loss	See cases	GPathogenic
Select item 155357	GRCh38/hg38 Xq13.2-28(chrX:74684615-156004066)x1	ABCB7, ABCD1 +1249 more	Copy number loss	See cases	GPathogenic
Select item 148019	GRCh38/hg38 Xq13.3-28(chrX:75086417-156022206)x1	LOC130068496, LOC130068497 +1244 more	Copy number loss	See cases	GPathogenic
Select item 155065	GRCh38/hg38 Xq13.3-28(chrX:76557425-156004066)x1	MCTS1, MECP2 +1229 more	Copy number loss	See cases	GPathogenic
Select item 148052	GRCh38/hg38 Xq13.3-28(chrX:76604011-156022206)x1	ABCD1, ACSL4 +1230 more	Copy number loss	See cases	GPathogenic
Select item 146131	GRCh38/hg38 Xq21.1-28(chrX:77369933-156013167)x1	LOC126863325, LOC126863326 +1225 more	Copy number loss	See cases	GPathogenic
Select item 154252	GRCh38/hg38 Xq21.1-28(chrX:78187188-156004066)x1	LOC130068537, LOC130068538 +1206 more	Copy number loss	See cases	GPathogenic
Select item 145168	GRCh38/hg38 Xq21.1-28(chrX:78605009-156016560)x1	LOC125467786, LOC125467787 +1203 more	Copy number loss	See cases	GPathogenic
Select item 146845	GRCh38/hg38 Xq21.1-28(chrX:79093152-156003229)x1	LAMP2, LDOC1 +1197 more	Copy number loss	See cases	GPathogenic
Select item 149834	GRCh38/hg38 Xq21.1-28(chrX:79911061-156003229)x1	ABCD1, ACSL4 +1193 more	Copy number loss	See cases	GPathogenic
Select item 154304	GRCh38/hg38 Xq21.1-23(chrX:81109470-109442793)x1	NXF5, PABPC5 +241 more	Copy number loss	See cases	GPathogenic
Select item 58661	GRCh38/hg38 Xq21.1-25(chrX:81261589-126519353)x3	LOC126863293, LOC126863294 +478 more	Copy number gain	See cases	GPathogenic
Select item 153436	GRCh38/hg38 Xq21.1-28(chrX:82096719-156004066)x1	LOC130068661, LOC130068662 +1181 more	Copy number loss	See cases	GPathogenic
Select item 150562	GRCh38/hg38 Xq21.1-28(chrX:82211310-156003229)x1	ABCD1, ACSL4 +1180 more	Copy number loss	See cases	GPathogenic
Select item 144262	GRCh38/hg38 Xq21.1-28(chrX:85123740-156022206)x3	LOC130068480, LOC130068481 +1169 more	Copy number gain	See cases	GPathogenic
Select item 153756	GRCh38/hg38 Xq21.2-28(chrX:86626431-156004066)x1	LOC101927830, LOC101928335 +1159 more	Copy number loss	See cases	GPathogenic
Select item 152897	GRCh38/hg38 Xq21.31-22.1(chrX:87807750-100286152)x3	CPXCR1, DIAPH2 +24 more	Copy number gain	See cases	GPathogenic
Select item 150509	GRCh38/hg38 Xq21.31-28(chrX:88339926-156003242)x1	ABCD1, ACSL4 +1155 more	Copy number loss	See cases	GPathogenic
Select item 153730	GRCh38/hg38 Xq21.31-28(chrX:89557622-156004066)x1	ABCD1, ACSL4 +1152 more	Copy number loss	See cases	GPathogenic
Select item 151176	GRCh38/hg38 Xq21.31-22.1(chrX:91225162-101026774)x1	ARL13A, CSTF2 +44 more	Copy number loss	See cases	GPathogenic
Select item 145981	GRCh38/hg38 Xq21.31-28(chrX:92222680-156016920)x1	ABCD1, ACSL4 +1150 more	Copy number loss	See cases	GPathogenic
Select item 150943	GRCh38/hg38 Xq21.32(chrX:93260274-93819899)x2	FAM133A, LOC126863289 +1 more	Copy number gain	See cases	GUncertain significance
Select item 150337	GRCh38/hg38 Xq21.32-23(chrX:93591590-112530092)x3	LOC130068508, LOC130068509 +250 more	Copy number gain	See cases	GPathogenic
Select item 2287080	NM_004538.6(NAP1L3):c.1517A>G (p.Lys506Arg)	NAP1L3 (K506R)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2474584	NM_004538.6(NAP1L3):c.1416A>T (p.Leu472Phe)	NAP1L3 (L472F)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2661017	NM_004538.6(NAP1L3):c.1407G>A (p.Gly469=)	NAP1L3	Single nucleotide variant (synonymous variant)	not provided	GLikely benign
Select item 2496342	NM_004538.6(NAP1L3):c.1378G>T (p.Ala460Ser)	NAP1L3 (A460S)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2615571	NM_004538.6(NAP1L3):c.1370G>C (p.Arg457Pro)	NAP1L3 (R457P)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2559184	NM_004538.6(NAP1L3):c.1348A>G (p.Met450Val)	NAP1L3 (M450V)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 208906	NM_004538.6(NAP1L3):c.1310C>G (p.Ala437Gly)	NAP1L3 (A437G)	Single nucleotide variant (missense variant)	Abnormality of neuronal migration	GBenign
Select item 3174932	NM_004538.6(NAP1L3):c.1309G>A (p.Ala437Thr)	NAP1L3 (A437T)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3174930	NM_004538.6(NAP1L3):c.1303C>T (p.Pro435Ser)	NAP1L3 (P435S)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2273763	NM_004538.6(NAP1L3):c.1104C>A (p.Phe368Leu)	NAP1L3 (F368L)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3174924	NM_004538.6(NAP1L3):c.1063A>T (p.Ser355Cys)	NAP1L3 (S355C)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2333387	NM_004538.6(NAP1L3):c.1026T>A (p.Asp342Glu)	NAP1L3 (D342E)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2218679	NM_004538.6(NAP1L3):c.1022C>T (p.Ser341Leu)	NAP1L3 (S341L)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2568552	NM_004538.6(NAP1L3):c.994T>C (p.Tyr332His)	NAP1L3 (Y332H)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2326497	NM_004538.6(NAP1L3):c.830T>C (p.Val277Ala)	NAP1L3 (V277A)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3174963	NM_004538.6(NAP1L3):c.824C>A (p.Ala275Asp)	NAP1L3 (A275D)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2613232	NM_004538.6(NAP1L3):c.697G>A (p.Glu233Lys)	NAP1L3 (E233K)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2337341	NM_004538.6(NAP1L3):c.527A>G (p.Glu176Gly)	NAP1L3 (E176G)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2368714	NM_004538.6(NAP1L3):c.503A>T (p.Asp168Val)	NAP1L3 (D168V)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3174952	NM_004538.6(NAP1L3):c.472A>G (p.Thr158Ala)	NAP1L3 (T158A)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3174950	NM_004538.6(NAP1L3):c.368C>A (p.Thr123Asn)	NAP1L3 (T123N)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2281560	NM_004538.6(NAP1L3):c.294T>A (p.Asp98Glu)	NAP1L3 (D98E)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2237581	NM_004538.6(NAP1L3):c.287T>G (p.Phe96Cys)	NAP1L3 (F96C)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 791488	NM_004538.6(NAP1L3):c.169_189del (p.Gly57_Ser63del)	NAP1L3	Deletion (inframe_deletion)	not provided	GBenign
Select item 2240830	NM_004538.6(NAP1L3):c.184A>G (p.Ser62Gly)	NAP1L3 (S62G)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3067425	NM_004538.6(NAP1L3):c.160AGC[1] (p.Ser55_Ser56del)	NAP1L3	Microsatellite (inframe_deletion)	not provided	GLikely benign

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