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GRCh37/hg19 5q33.2-33.3(chr5:153785664-156189369)x1 AND not provided

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
May 31, 2018
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000847656.2

Allele description [Variation Report for GRCh37/hg19 5q33.2-33.3(chr5:153785664-156189369)x1]

GRCh37/hg19 5q33.2-33.3(chr5:153785664-156189369)x1

Genes:
  • CNOT8:CCR4-NOT transcription complex subunit 8 [Gene - OMIM - HGNC]
  • LARP1:La ribonucleoprotein 1, translational regulator [Gene - OMIM - HGNC]
  • SAP30L:SAP30 like [Gene - OMIM - HGNC]
  • FAXDC2:fatty acid hydroxylase domain containing 2 [Gene - OMIM - HGNC]
  • GEMIN5:gem nuclear organelle associated protein 5 [Gene - OMIM - HGNC]
  • HAND1:heart and neural crest derivatives expressed 1 [Gene - OMIM - HGNC]
  • KIF4B:kinesin family member 4B [Gene - OMIM - HGNC]
  • MRPL22:mitochondrial ribosomal protein L22 [Gene - OMIM - HGNC]
  • GALNT10:polypeptide N-acetylgalactosaminyltransferase 10 [Gene - OMIM - HGNC]
  • SGCD:sarcoglycan delta [Gene - OMIM - HGNC]
Variant type:
copy number loss
Cytogenetic location:
5q33.2-33.3
Genomic location:
Chr5: 153785664 - 156189369 (on Assembly GRCh37)
Preferred name:
GRCh37/hg19 5q33.2-33.3(chr5:153785664-156189369)x1
HGVS:
NC_000005.9:g.(?_153785664)_(156189369_?)del

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: CN517202

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Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV000989778Bionano Laboratories
no assertion criteria provided
Uncertain significance
(May 31, 2018) 		unknownclinical testing

Help

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Bionano Laboratories, SCV000989778.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownunknownnot providedBuccalnot providednot providednot providednot providednot provided

Last Updated: Dec 11, 2022