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GRCh37/hg19 22q12.1-12.2(chr22:28291202-30450920)x1 AND not provided

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Mar 18, 2020
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001258778.1

Allele description [Variation Report for GRCh37/hg19 22q12.1-12.2(chr22:28291202-30450920)x1]

GRCh37/hg19 22q12.1-12.2(chr22:28291202-30450920)x1

Genes:
  • EMID1:EMI domain containing 1 [Gene - OMIM - HGNC]
  • EWSR1:EWS RNA binding protein 1 [Gene - OMIM - HGNC]
  • HSCB:HscB mitochondrial iron-sulfur cluster cochaperone [Gene - OMIM - HGNC]
  • NF2:NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor [Gene - OMIM - HGNC]
  • RASL10A:RAS like family 10 member A [Gene - OMIM - HGNC]
  • RFPL1S:RFPL1 antisense RNA 1 [Gene - OMIM - HGNC]
  • THOC5:THO complex subunit 5 [Gene - OMIM - HGNC]
  • XBP1:X-box binding protein 1 [Gene - OMIM - HGNC]
  • ASCC2:activating signal cointegrator 1 complex subunit 2 [Gene - OMIM - HGNC]
  • AP1B1:adaptor related protein complex 1 subunit beta 1 [Gene - OMIM - HGNC]
  • CABP7:calcium binding protein 7 [Gene - OMIM - HGNC]
  • CHEK2:checkpoint kinase 2 [Gene - OMIM - HGNC]
  • C22orf31:chromosome 22 open reading frame 31 [Gene - HGNC]
  • CCDC117:coiled-coil domain containing 117 [Gene - HGNC]
  • GAS2L1:growth arrest specific 2 like 1 [Gene - OMIM - HGNC]
  • KREMEN1:kringle containing transmembrane protein 1 [Gene - OMIM - HGNC]
  • MTMR3:myotubularin related protein 3 [Gene - OMIM - HGNC]
  • NEFH:neurofilament heavy chain [Gene - OMIM - HGNC]
  • NIPSNAP1:nipsnap homolog 1 [Gene - OMIM - HGNC]
  • PITPNB:phosphatidylinositol transfer protein beta [Gene - OMIM - HGNC]
  • RFPL1:ret finger protein like 1 [Gene - OMIM - HGNC]
  • RHBDD3:rhomboid domain containing 3 [Gene - HGNC]
  • TTC28:tetratricopeptide repeat domain 28 [Gene - OMIM - HGNC]
  • UQCR10:ubiquinol-cytochrome c reductase, complex III subunit X [Gene - OMIM - HGNC]
  • ZNRF3:zinc and ring finger 3 [Gene - OMIM - HGNC]
  • ZMAT5:zinc finger matrin-type 5 [Gene - OMIM - HGNC]
Variant type:
copy number loss
Cytogenetic location:
22q12.1-12.2
Genomic location:
Chr22: 28291202 - 30450920 (on Assembly GRCh37)
Preferred name:
GRCh37/hg19 22q12.1-12.2(chr22:28291202-30450920)x1
HGVS:
NC_000022.10:g.(?_28291202)_(30450920_?)del

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: CN517202

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001435747Quest Diagnostics Nichols Institute San Juan Capistrano
no assertion criteria provided
Pathogenic
(Mar 18, 2020)
germlineclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Quest Diagnostics Nichols Institute San Juan Capistrano, SCV001435747.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Nov 5, 2022