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NM_002257.4(KLK1):c.230G>A (p.Arg77His) AND Kallikrein, decreased urinary activity of

Germline classification:
Affects (1 submission)
Last evaluated:
Mar 1, 2005
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000015766.27

Allele description [Variation Report for NM_002257.4(KLK1):c.230G>A (p.Arg77His)]

NM_002257.4(KLK1):c.230G>A (p.Arg77His)

Gene:
KLK1:kallikrein 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
19q13.33
Genomic location:
Preferred name:
NM_002257.4(KLK1):c.230G>A (p.Arg77His)
Other names:
R53H
HGVS:
  • NC_000019.10:g.50820420C>T
  • NG_012094.1:g.8368G>A
  • NM_002257.4:c.230G>AMANE SELECT
  • NP_002248.1:p.Arg77His
  • NC_000019.9:g.51323676C>T
  • P06870:p.Arg77His
Protein change:
R77H; ARG53HIS
Links:
UniProtKB: P06870#VAR_014567; OMIM: 147910.0001; dbSNP: rs5515
NCBI 1000 Genomes Browser:
rs5515
Molecular consequence:
  • NM_002257.4:c.230G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Kallikrein, decreased urinary activity of
Identifiers:
MONDO: MONDO:0014415; MedGen: C1835808; OMIM: 615953

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000036031OMIM
no assertion criteria provided
Affects
(Mar 1, 2005)
germlineliterature only

PubMed (2)
[See all records that cite these PMIDs]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlinenot providednot providednot providednot providednot providednot providedliterature only

Citations

PubMed

Loss-of-function polymorphism of the human kallikrein gene with reduced urinary kallikrein activity.

Slim R, Torremocha F, Moreau T, Pizard A, Hunt SC, Vuagnat A, Williams GH, Gauthier F, Jeunemaitre X, Alhenc-Gelas F.

J Am Soc Nephrol. 2002 Apr;13(4):968-976. doi: 10.1681/ASN.V134968.

PubMed [citation]
PMID:
11912256

Arterial and renal consequences of partial genetic deficiency in tissue kallikrein activity in humans.

Azizi M, Boutouyrie P, Bissery A, Agharazii M, Verbeke F, Stern N, Bura-Rivière A, Laurent S, Alhenc-Gelas F, Jeunemaitre X.

J Clin Invest. 2005 Mar;115(3):780-7.

PubMed [citation]
PMID:
15765151
PMCID:
PMC1052005

Details of each submission

From OMIM, SCV000036031.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedliterature only PubMed (2)

Description

In individuals heterozygous for a 230G-A transition in exon 3 of the KLKR gene, resulting in an arg53-to-his (R53H) substitution, Slim et al. (2002) identified a significant decrease in urinary kallikrein activity compared to controls (615953). This polymorphism was significantly more common in Afro-Caribbean individuals. Analysis of recombinant kallikrein variants revealed a major decrease in enzyme activity when arg53 was replaced by histidine, and a model of kallikrein derived from crystallographic data suggested that arg53 is involved in substrate binding.

In a study of 30 R53R homozygous and 10 R53H heterozygous young normotensive white males, Azizi et al. (2005) observed a 50 to 60% reduction in urinary kallikrein activity in R53H individuals, but renal and hormonal adaptation to dietary changes in sodium and potassium were unaffected. However, in studies of brachial artery function, R53H individuals consistently exhibited an increase in wall shear stress and a paradoxical reduction in artery diameter and lumen compared to R53R individuals. Azizi et al. (2005) concluded that this partial genetic deficiency in kallikrein activity is associated with a form of arterial dysfunction involving inappropriate inward remodeling of the brachial artery despite a chronic increase in shear stress.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlinenot providednot providednot providednot providednot providednot providednot providednot provided

Last Updated: Dec 24, 2023