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NM_016038.4(SBDS):c.652C>T (p.Arg218Ter) AND Shwachman-Diamond syndrome 1

Germline classification:
not provided (1 submission)
Review status:
no classification provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000020735.3

Allele description [Variation Report for NM_016038.4(SBDS):c.652C>T (p.Arg218Ter)]

NM_016038.4(SBDS):c.652C>T (p.Arg218Ter)

Gene:
SBDS:SBDS ribosome maturation factor [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
7q11.21
Genomic location:
Preferred name:
NM_016038.4(SBDS):c.652C>T (p.Arg218Ter)
HGVS:
  • NC_000007.14:g.66988472G>A
  • NG_007277.1:g.12130C>T
  • NM_016038.3:c.652C>T
  • NM_016038.4:c.652C>TMANE SELECT
  • NP_057122.2:p.Arg218Ter
  • LRG_104t1:c.652C>T
  • LRG_104:g.12130C>T
  • LRG_104p1:p.Arg218Ter
  • NC_000007.13:g.66453459G>A
  • NM_016038.2:c.652C>T
  • NM_016038.4:c.652C>T
Protein change:
R218*
Links:
dbSNP: rs113993998
NCBI 1000 Genomes Browser:
rs113993998
Molecular consequence:
  • NM_016038.4:c.652C>T - nonsense - [Sequence Ontology: SO:0001587]

Condition(s)

Name:
Shwachman-Diamond syndrome 1 (SDS1)
Identifiers:
MONDO: MONDO:0044204; MedGen: C4692625; OMIM: 260400

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000041310GeneReviews
no classification provided
not providedgermlineliterature only

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedliterature only

Details of each submission

From GeneReviews, SCV000041310.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedliterature onlynot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Dec 30, 2023