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NM_003002.4(SDHD):c.242C>T (p.Pro81Leu) AND Paragangliomas 1 with sensorineural hearing loss

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Aug 1, 2003
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000023206.15

Allele description

NM_003002.4(SDHD):c.242C>T (p.Pro81Leu)

Gene:
SDHD:succinate dehydrogenase complex subunit D [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
11q23.1
Genomic location:
Preferred name:
NM_003002.4(SDHD):c.242C>T (p.Pro81Leu)
HGVS:
  • NC_000011.10:g.112088939C>T
  • NG_012337.3:g.7093C>T
  • NG_033145.1:g.2860G>A
  • NM_001276503.2:c.169+966C>T
  • NM_001276504.2:c.125C>T
  • NM_001276506.2:c.242C>T
  • NM_003002.4:c.242C>TMANE SELECT
  • NP_001263433.1:p.Pro42Leu
  • NP_001263435.1:p.Pro81Leu
  • NP_002993.1:p.Pro81Leu
  • LRG_9t1:c.242C>T
  • LRG_9:g.7093C>T
  • LRG_9p1:p.Pro81Leu
  • NC_000011.9:g.111959663C>T
  • NM_001276506.1:c.242C>T
  • NM_003002.1:c.242C>T
  • NM_003002.2:c.242C>T
  • NM_003002.3:c.242C>T
  • NR_077060.2:n.277C>T
  • O14521:p.Pro81Leu
  • p.P81L
Protein change:
P42L; PRO81LEU
Links:
UniProtKB: O14521#VAR_010038; OMIM: 602690.0003; dbSNP: rs80338844
NCBI 1000 Genomes Browser:
rs80338844
Molecular consequence:
  • NM_001276503.2:c.169+966C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001276504.2:c.125C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001276506.2:c.242C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_003002.4:c.242C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NR_077060.2:n.277C>T - non-coding transcript variant - [Sequence Ontology: SO:0001619]

Condition(s)

Name:
Paragangliomas 1 with sensorineural hearing loss
Identifiers:
MedGen: C3276074

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000044497OMIM
no assertion criteria provided
Pathogenic
(Aug 1, 2003)
unknownliterature only

PubMed (6)
[See all records that cite these PMIDs]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownnot providednot providednot providednot providednot providednot providedliterature only

Citations

PubMed

Mutations in SDHD, a mitochondrial complex II gene, in hereditary paraganglioma.

Baysal BE, Ferrell RE, Willett-Brozick JE, Lawrence EC, Myssiorek D, Bosch A, van der Mey A, Taschner PE, Rubinstein WS, Myers EN, Richard CW 3rd, Cornelisse CJ, Devilee P, Devlin B.

Science. 2000 Feb 4;287(5454):848-51.

PubMed [citation]
PMID:
10657297

Novel mutations and the emergence of a common mutation in the SDHD gene causing familial paraganglioma.

Milunsky JM, Maher TA, Michels VV, Milunsky A.

Am J Med Genet. 2001 May 15;100(4):311-4.

PubMed [citation]
PMID:
11343322
See all PubMed Citations (6)

Details of each submission

From OMIM, SCV000044497.5

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedliterature only PubMed (6)

Description

Paragangliomas 1 with or without Sensorneural Hearing Loss

In 5 families with autosomal dominant hereditary paraganglioma (PGL1; 168000), Baysal et al. (2000) identified a C-to-T transition in the SDHD gene, resulting in a pro81-to-leu (P81L) substitution. The proline at position 81 is conserved in human, Bos taurus, Ascaris, and Caenorhabditis elegans.

Milunsky et al. (2001) found the pro81-to-leu mutation in 3 of 7 families with hereditary paragangliomas. Since this mutation results in the elimination of a normally occurring restriction endonuclease site (MspI), Milunsky et al. (2001) developed a restriction enzyme assay to screen for this mutation.

Badenhop et al. (2001) found the P81L mutation in an individual with sensorineural deafness in association with paragangliomas, as well as in 3 other family members who had only paragangliomas.

In an analysis of 23 families with paragangliomas-1, Astrom et al. (2003) identified the P81L mutation in 14 (approximately 61%). P81L had been implicated both as a founder and as a recurrent mutation among U.S. families (Baysal et al., 2002). Haplotype analyses of the 14 P81L carrier families indicated that 5 lacked the founder haplotype, suggesting independent origin.

Pheochromocytoma, Somatic

Gimm et al. (2000) found the P81L mutation in the heterozygous state as a somatic mutation in tumor tissue from a patient with sporadic (nonfamilial) pheochromocytoma (see 171300). Flanking markers also showed loss of heterozygosity.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownnot providednot providednot providednot providednot providednot providednot providednot provided

Last Updated: Apr 20, 2024