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NM_004333.6(BRAF):c.1992+16G>C AND RASopathy

Germline classification:
Benign (2 submissions)
Last evaluated:
Feb 1, 2024
Review status:
2 stars out of maximum of 4 stars
criteria provided, multiple submitters, no conflicts
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000033340.10

Allele description [Variation Report for NM_004333.6(BRAF):c.1992+16G>C]

NM_004333.6(BRAF):c.1992+16G>C

Gene:
BRAF:B-Raf proto-oncogene, serine/threonine kinase [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
7q34
Genomic location:
Preferred name:
NM_004333.6(BRAF):c.1992+16G>C
HGVS:
  • NC_000007.14:g.140749271C>G
  • NG_007873.3:g.180494G>C
  • NM_001354609.2:c.1992+16G>C
  • NM_001374244.1:c.2112+16G>C
  • NM_001374258.1:c.2112+16G>C
  • NM_001378467.1:c.2001+16G>C
  • NM_001378468.1:c.1992+16G>C
  • NM_001378469.1:c.1926+16G>C
  • NM_001378470.1:c.1890+16G>C
  • NM_001378471.1:c.1881+16G>C
  • NM_001378472.1:c.1836+16G>C
  • NM_001378473.1:c.1836+16G>C
  • NM_001378474.1:c.1992+16G>C
  • NM_001378475.1:c.1728+16G>C
  • NM_004333.6:c.1992+16G>CMANE SELECT
  • LRG_299t1:c.1992+16G>C
  • LRG_299:g.180494G>C
  • NC_000007.13:g.140449071C>G
  • NM_004333.4:c.1992+16G>C
Links:
dbSNP: rs3789806
NCBI 1000 Genomes Browser:
rs3789806
Molecular consequence:
  • NM_001354609.2:c.1992+16G>C - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001374244.1:c.2112+16G>C - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001374258.1:c.2112+16G>C - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001378467.1:c.2001+16G>C - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001378468.1:c.1992+16G>C - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001378469.1:c.1926+16G>C - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001378470.1:c.1890+16G>C - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001378471.1:c.1881+16G>C - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001378472.1:c.1836+16G>C - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001378473.1:c.1836+16G>C - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001378474.1:c.1992+16G>C - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001378475.1:c.1728+16G>C - intron variant - [Sequence Ontology: SO:0001627]
  • NM_004333.6:c.1992+16G>C - intron variant - [Sequence Ontology: SO:0001627]

Condition(s)

Name:
RASopathy
Synonyms:
rasopathies; Noonan spectrum disorder
Identifiers:
MONDO: MONDO:0021060; MedGen: C5555857

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Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV000057245GeneDx
criteria provided, single submitter

(GeneDx Variant Classification (06012015))		POLYunknownclinical testing

Citation Link,

SCV002408827Labcorp Genetics (formerly Invitae), Labcorp
criteria provided, single submitter

(Invitae Variant Classification Sherloc (09022015))		Benign
(Feb 1, 2024) 		germlineclinical testing

PubMed (1)
[See all records that cite this PMID]

Help

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing
not providedunknownnot providednot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

Sherloc: a comprehensive refinement of the ACMG-AMP variant classification criteria.

Nykamp K, Anderson M, Powers M, Garcia J, Herrera B, Ho YY, Kobayashi Y, Patil N, Thusberg J, Westbrook M; Invitae Clinical Genomics Group., Topper S.

Genet Med. 2017 Oct;19(10):1105-1117. doi: 10.1038/gim.2017.37. Epub 2017 May 11. Erratum in: Genet Med. 2020 Jan;22(1):240. doi: 10.1038/s41436-019-0624-9.

PubMed [citation]
PMID:
28492532
PMCID:
PMC5632818

Details of each submission

From GeneDx, SCV000057245.3

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

Converted during submission to Benign.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownnot providednot providednot providednot providednot providednot providednot providednot provided

From Labcorp Genetics (formerly Invitae), Labcorp, SCV002408827.3

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024