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NM_000158.4(GBE1):c.986A>C (p.Tyr329Ser) AND Adult polyglucosan body neuropathy

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Dec 1, 1998
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000150105.10

Allele description [Variation Report for NM_000158.4(GBE1):c.986A>C (p.Tyr329Ser)]

NM_000158.4(GBE1):c.986A>C (p.Tyr329Ser)

Gene:
GBE1:1,4-alpha-glucan branching enzyme 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
3p12.2
Genomic location:
Preferred name:
NM_000158.4(GBE1):c.986A>C (p.Tyr329Ser)
Other names:
NM_000158.4(GBE1):c.986A>C
HGVS:
  • NC_000003.12:g.81642787T>G
  • NG_011810.1:g.124014A>C
  • NM_000158.4:c.986A>CMANE SELECT
  • NP_000149.4:p.Tyr329Ser
  • NC_000003.11:g.81691938T>G
  • NM_000158.3:c.986A>C
  • Q04446:p.Tyr329Ser
  • p.Y329S
Protein change:
Y329S; TYR329SER
Links:
UniProtKB: Q04446#VAR_022431; OMIM: 607839.0002; dbSNP: rs80338671
NCBI 1000 Genomes Browser:
rs80338671
Molecular consequence:
  • NM_000158.4:c.986A>C - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Adult polyglucosan body neuropathy
Identifiers:
MedGen: C4017118

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000196929OMIM
no assertion criteria provided
Pathogenic
(Dec 1, 1998)
germlineliterature only

PubMed (4)
[See all records that cite these PMIDs]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlinenot providednot providednot providednot providednot providednot providedliterature only

Citations

PubMed

Hepatic and neuromuscular forms of glycogen storage disease type IV caused by mutations in the same glycogen-branching enzyme gene.

Bao Y, Kishnani P, Wu JY, Chen YT.

J Clin Invest. 1996 Feb 15;97(4):941-8.

PubMed [citation]
PMID:
8613547
PMCID:
PMC507139

Adult polyglucosan body disease in Ashkenazi Jewish patients carrying the Tyr329Ser mutation in the glycogen-branching enzyme gene.

Lossos A, Meiner Z, Barash V, Soffer D, Schlesinger I, Abramsky O, Argov Z, Shpitzen S, Meiner V.

Ann Neurol. 1998 Dec;44(6):867-72.

PubMed [citation]
PMID:
9851430
See all PubMed Citations (4)

Details of each submission

From OMIM, SCV000196929.7

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedliterature only PubMed (4)

Description

Glycogen Storage Disease IV

In a Jewish female infant with the nonprogressive hepatic form of glycogen storage disease IV (GSD4; 232500), Bao et al. (1996) found 2 missense mutations on separate alleles of the GBE1 gene: leu224-to-pro (L224P; 607839.0003) and tyr329-to-ser (Y329S). The L224P mutation resulted in complete loss of GBE1 activity, whereas the Y329S mutation resulted in loss of approximately 50% of GBE1 activity. Bao et al. (1996) detected the Y329S allele in another patient with the nonprogressive form of GSD IV but not in 35 unrelated controls or in patients with the more severe forms of GSD IV. The Y329S substitution resulted from an A-to-C transversion at nucleotide 1076. The second patient with the Y329S allele was 20 years old at the time of report and had normal liver function.

Adult Polyglucosan Body Neuropathy

In 7 Jewish patients with adult polyglucosan body neuropathy (APBN; 263570), Lossos et al. (1998) identified homozygosity for the Y329S mutation. The authors concluded that despite the very different phenotypes of APBN and GSD IV, they are allelic disorders.

Mochel et al. (2012) identified the Y329S mutation in 35 (76%) of 50 patients with APBN, all of whom were of Ashkenazi Jewish origin. Thirteen of the patients carried the Y329S mutation in heterozygous state, but the gene was not exhaustively studied for other possible variants. Akman et al. (2015) performed follow-up of some of the heterozygous patients reported by Mochel et al. (2012). In a cohort of 16 patients of Ashkenazi Jewish descent who were initially found to be heterozygous for the Y329S mutation, Akman et al. (2015) found that 3 were compound heterozygous for Y329S, caused by a c.986A-C transversion in exon 7, and a c.671T-C transition, resulting in a leu224-to-pro (L224P; 607839.0003) substitution. The remaining 16 heterozygous patients carried a complex deep intronic del/ins mutation in intron 15 (607839.0020) that resulted in a truncated protein. Haplotype analysis suggested a founder effect for the deep intronic mutation. The mean GBE activity in compound heterozygotes was 8% of normal compared to 18% of normal in Y329S homozygotes.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlinenot providednot providednot providednot providednot providednot providednot providednot provided

Last Updated: May 12, 2024