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NM_005902.4(SMAD3):c.860G>A (p.Arg287Gln) AND Loeys-Dietz syndrome

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Aug 26, 2014
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000157501.1

Allele description [Variation Report for NM_005902.4(SMAD3):c.860G>A (p.Arg287Gln)]

NM_005902.4(SMAD3):c.860G>A (p.Arg287Gln)

Gene:
SMAD3:SMAD family member 3 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
15q22.33
Genomic location:
Preferred name:
NM_005902.4(SMAD3):c.860G>A (p.Arg287Gln)
Other names:
p.R287Q:CGG>CAG
HGVS:
  • NC_000015.10:g.67181442G>A
  • NG_011990.1:g.120586G>A
  • NM_001145102.2:c.545G>A
  • NM_001145103.2:c.728G>A
  • NM_001145104.2:c.275G>A
  • NM_005902.4:c.860G>AMANE SELECT
  • NP_001138574.1:p.Arg182Gln
  • NP_001138575.1:p.Arg243Gln
  • NP_001138576.1:p.Arg92Gln
  • NP_005893.1:p.Arg287Gln
  • NC_000015.9:g.67473780G>A
  • NM_005902.3:c.860G>A
Protein change:
R182Q
Links:
dbSNP: rs730880214
NCBI 1000 Genomes Browser:
rs730880214
Molecular consequence:
  • NM_001145102.2:c.545G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001145103.2:c.728G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001145104.2:c.275G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_005902.4:c.860G>A - missense variant - [Sequence Ontology: SO:0001583]
Observations:
1

Condition(s)

Name:
Loeys-Dietz syndrome (LDS)
Identifiers:
MONDO: MONDO:0018954; MedGen: C2697932; OMIM: PS609192

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000207246Blueprint Genetics
no assertion criteria provided
Uncertain significance
(Aug 26, 2014)
germlineclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyes1not providednot providednot providednot providedclinical testing

Details of each submission

From Blueprint Genetics, SCV000207246.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot provided1not providednot providednot provided

Last Updated: Feb 20, 2024