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NM_004612.4(TGFBR1):c.613A>G (p.Ile205Val) AND not provided

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Dec 6, 2018
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000199482.10

Allele description [Variation Report for NM_004612.4(TGFBR1):c.613A>G (p.Ile205Val)]

NM_004612.4(TGFBR1):c.613A>G (p.Ile205Val)

Gene:
TGFBR1:transforming growth factor beta receptor 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
9q22.33
Genomic location:
Preferred name:
NM_004612.4(TGFBR1):c.613A>G (p.Ile205Val)
Other names:
p.I205V:ATT>GTT
HGVS:
  • NC_000009.12:g.99137897A>G
  • NG_007461.1:g.37768A>G
  • NM_001130916.3:c.382A>G
  • NM_001306210.2:c.625A>G
  • NM_004612.4:c.613A>GMANE SELECT
  • NP_001124388.1:p.Ile128Val
  • NP_001293139.1:p.Ile209Val
  • NP_004603.1:p.Ile205Val
  • NC_000009.11:g.101900179A>G
  • NM_004612.2:c.613A>G
  • NM_004612.3:c.613A>G
Protein change:
I128V
Links:
dbSNP: rs200018073
NCBI 1000 Genomes Browser:
rs200018073
Molecular consequence:
  • NM_001130916.3:c.382A>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001306210.2:c.625A>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_004612.4:c.613A>G - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000250906GeneDx
criteria provided, single submitter

(GeneDx Variant Classification (06012015))
Uncertain significance
(Dec 6, 2018)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From GeneDx, SCV000250906.14

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

p.Ile205Val (ATT>GTT): c.613 A>G in exon 4 of the TGFBR1 gene (NM_004612.2) The I205V variant of unknown significance in the TGFBR1 gene has not been published as a mutation, nor has it been reported as a benign polymorphism to our knowledge. The I205V variant was not observed in approximately 6,500 individuals of European and African American ancestry in the NHLBI Exome Sequencing Project, indicating it is not a common benign variant in these populations. Although the I205V variant is a conservative amino acid substitution, which is not likely to impact secondary protein structure as these residues share similar properties, this substitution occurs at a position that is conserved across species. In silico analysis predicts this variant is probably damaging to the protein structure/function. Missense mutations in nearby residues (T200P, T200I) have been reported in association with Loeys-Dietz syndrome, supporting the functional importance of this region of the protein. Therefore, based on the currently available information, it is unclear whether this variant is a pathogenic mutation or a rare benign variant. This variant was found in TAAD

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: May 19, 2024