U.S. flag

An official website of the United States government

NM_001308093.3(GATA4):c.25G>A (p.Ala9Thr) AND Congenital heart disease

Germline classification:
Pathogenic (1 submission)
Last evaluated:
May 15, 2013
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000203597.1

Allele description [Variation Report for NM_001308093.3(GATA4):c.25G>A (p.Ala9Thr)]

NM_001308093.3(GATA4):c.25G>A (p.Ala9Thr)

Gene:
GATA4:GATA binding protein 4 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
8p23.1
Genomic location:
Preferred name:
NM_001308093.3(GATA4):c.25G>A (p.Ala9Thr)
HGVS:
  • NC_000008.11:g.11708337G>A
  • NG_008177.2:g.36419G>A
  • NM_001308093.3:c.25G>AMANE SELECT
  • NM_001308094.2:c.-6+7559G>A
  • NM_001374273.1:c.-3+4033G>A
  • NM_001374274.1:c.-3+323G>A
  • NM_002052.5:c.25G>A
  • NP_001295022.1:p.Ala9Thr
  • NP_002043.2:p.Ala9Thr
  • NC_000008.10:g.11565846G>A
  • NM_001308093.1:c.25G>A
  • NM_002052.4:c.25G>A
Protein change:
A9T
Links:
dbSNP: rs864321699
NCBI 1000 Genomes Browser:
rs864321699
Molecular consequence:
  • NM_001308094.2:c.-6+7559G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001374273.1:c.-3+4033G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001374274.1:c.-3+323G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001308093.3:c.25G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_002052.5:c.25G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Congenital heart disease (CHD)
Identifiers:
MONDO: MONDO:0005453; MedGen: C0152021

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000258959Cytogenetics- Mohapatra Lab, Banaras Hindu University
no assertion criteria provided
Pathogenic
(May 15, 2013)
unknowncase-control

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
Indianunknownyes1not providednot providednot providednot providedcase-control

Details of each submission

From Cytogenetics- Mohapatra Lab, Banaras Hindu University, SCV000258959.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1Indian1not providednot providedcase-controlnot provided

Description

1 individual diagnosed with Atrial Septal defect with pulmonary stenosis

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownyesnot providednot providednot provided1not providednot providednot provided

Last Updated: Feb 13, 2023