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NM_000169.3(GLA):c.461T>C (p.Ile154Thr) AND Fabry disease

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Jan 1, 2014
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000208908.2

Allele description [Variation Report for NM_000169.3(GLA):c.461T>C (p.Ile154Thr)]

NM_000169.3(GLA):c.461T>C (p.Ile154Thr)

Genes:
RPL36A-HNRNPH2:RPL36A-HNRNPH2 readthrough [Gene - HGNC]
GLA:galactosidase alpha [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
Xq22.1
Genomic location:
Preferred name:
NM_000169.3(GLA):c.461T>C (p.Ile154Thr)
HGVS:
  • NC_000023.11:g.101401718A>G
  • NG_007119.1:g.11246T>C
  • NM_000169.3:c.461T>CMANE SELECT
  • NM_001199973.2:c.300+6261A>G
  • NM_001199974.2:c.177+9896A>G
  • NM_001406747.1:c.584T>C
  • NM_001406748.1:c.461T>C
  • NM_001406749.1:c.584T>C
  • NP_000160.1:p.Ile154Thr
  • NP_000160.1:p.Ile154Thr
  • NP_001393676.1:p.Ile195Thr
  • NP_001393677.1:p.Ile154Thr
  • NP_001393678.1:p.Ile195Thr
  • LRG_672t1:c.461T>C
  • LRG_672:g.11246T>C
  • LRG_672p1:p.Ile154Thr
  • NC_000023.10:g.100656706A>G
  • NM_000169.2:c.461T>C
  • NR_164783.1:n.483T>C
  • NR_176252.1:n.483T>C
  • NR_176253.1:n.483T>C
  • P06280:p.Ile154Thr
Protein change:
I154T
Links:
UniProtKB: P06280#VAR_077383; dbSNP: rs869312143
NCBI 1000 Genomes Browser:
rs869312143
Molecular consequence:
  • NM_001199973.2:c.300+6261A>G - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001199974.2:c.177+9896A>G - intron variant - [Sequence Ontology: SO:0001627]
  • NM_000169.3:c.461T>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001406747.1:c.584T>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001406748.1:c.461T>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001406749.1:c.584T>C - missense variant - [Sequence Ontology: SO:0001583]
  • NR_164783.1:n.483T>C - non-coding transcript variant - [Sequence Ontology: SO:0001619]
  • NR_176252.1:n.483T>C - non-coding transcript variant - [Sequence Ontology: SO:0001619]
  • NR_176253.1:n.483T>C - non-coding transcript variant - [Sequence Ontology: SO:0001619]

Condition(s)

Name:
Fabry disease
Synonyms:
Angiokeratoma, diffuse; Anderson-Fabry disease; Hereditary dystopic lipidosis; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0010526; MedGen: C0002986; Orphanet: 324; OMIM: 301500; Human Phenotype Ontology: HP:0001071

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Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV000246043Albrecht-Kossel-Institute, Medical University Rostock
no assertion criteria provided
Uncertain significance
(Jan 1, 2014) 		inheritedresearch

PubMed (1)
[See all records that cite this PMID]

Help

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedinheritedunknownnot providednot providednot providednot providednot providedresearch

Citations

PubMed

Functional and Clinical Consequences of Novel α-Galactosidase A Mutations in Fabry Disease.

Lukas J, Scalia S, Eichler S, Pockrandt AM, Dehn N, Cozma C, Giese AK, Rolfs A.

Hum Mutat. 2016 Jan;37(1):43-51. doi: 10.1002/humu.22910. Epub 2015 Oct 27.

PubMed [citation]
PMID:
26415523

Details of each submission

From Albrecht-Kossel-Institute, Medical University Rostock, SCV000246043.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedresearch PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1inheritedunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 16, 2024