U.S. flag

An official website of the United States government

NM_000059.4(BRCA2):c.9633dup (p.Gly3212fs) AND not provided

Germline classification:
Likely pathogenic (1 submission)
Last evaluated:
Jun 6, 2016
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000480880.1

Allele description [Variation Report for NM_000059.4(BRCA2):c.9633dup (p.Gly3212fs)]

NM_000059.4(BRCA2):c.9633dup (p.Gly3212fs)

Gene:
BRCA2:BRCA2 DNA repair associated [Gene - OMIM - HGNC]
Variant type:
Duplication
Cytogenetic location:
13q13.1
Genomic location:
Preferred name:
NM_000059.4(BRCA2):c.9633dup (p.Gly3212fs)
HGVS:
  • NC_000013.11:g.32397029dup
  • NG_012772.3:g.86550dup
  • NM_000059.4:c.9633dupMANE SELECT
  • NP_000050.2:p.Gly3212fs
  • NP_000050.3:p.Gly3212fs
  • LRG_293t1:c.9633dup
  • LRG_293:g.86550dup
  • LRG_293p1:p.Gly3212fs
  • NC_000013.10:g.32971165_32971166insA
  • NC_000013.10:g.32971166dup
  • NM_000059.3:c.9633dup
  • NM_000059.3:c.9633dupA
  • p.(Gly3212ArgfsTer10)
Protein change:
G3212fs
Links:
dbSNP: rs1555289805
NCBI 1000 Genomes Browser:
rs1555289805
Molecular consequence:
  • NM_000059.4:c.9633dup - frameshift variant - [Sequence Ontology: SO:0001589]

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000570557GeneDx
criteria provided, single submitter

(GeneDx Variant Classification (06012015))
Likely pathogenic
(Jun 6, 2016)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From GeneDx, SCV000570557.4

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

This duplication of one nucleotide in BRCA2 is denoted c.9633dupA at the cDNA level and p.Gly3212ArgfsX10 (G3212RfsX10) at the protein level. The normal sequence, with the base that is duplicated in braces, is GTAC[A]GGAA. The duplication causes a frameshift which changes a Glycine to an Arginine at codon 3212, and creates a premature stop codon at position 10 of the new reading frame. While this variant is not expected to lead to nonsense-mediated decay, it is predicted to cause loss of normal protein function through protein truncation. BRCA2 c.9633dupA is expected to result in the loss of the nuclear localization signals 1 and 2 (NLS1/NLS2) and the Cyclin A and RAD51 binding domains (Esashi 2005, Borg 2010, Roy 2012). Using alternate nomenclature, this variant would be defined as BRCA2 9861dupA. This duplication has not, to our knowledge, been reported in the literature. Based on the currently available evidence, we consider BRCA2 c.9633dupA to be a likely pathogenic variant.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Mar 30, 2024