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NM_001171.6(ABCC6):c.4377C>T (p.Arg1459=) AND Autosomal recessive inherited pseudoxanthoma elasticum

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Feb 16, 2021
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000499227.3

Allele description [Variation Report for NM_001171.6(ABCC6):c.4377C>T (p.Arg1459=)]

NM_001171.6(ABCC6):c.4377C>T (p.Arg1459=)

Genes:
ABCC6:ATP binding cassette subfamily C member 6 [Gene - OMIM - HGNC]
LOC125146421:Sharpr-MPRA regulatory region 15590 [Gene]
Variant type:
single nucleotide variant
Cytogenetic location:
16p13.11
Genomic location:
Preferred name:
NM_001171.6(ABCC6):c.4377C>T (p.Arg1459=)
HGVS:
  • NC_000016.10:g.16150604G>A
  • NG_007558.3:g.78014C>T
  • NM_001171.6:c.4377C>TMANE SELECT
  • NM_001351800.1:c.4035C>T
  • NP_001162.4:p.Arg1459=
  • NP_001162.5:p.Arg1459=
  • NP_001338729.1:p.Arg1345=
  • LRG_1115t1:c.4377C>T
  • LRG_1115:g.78014C>T
  • LRG_1115p1:p.Arg1459=
  • NC_000016.9:g.16244461G>A
  • NG_007558.2:g.77868C>T
  • NM_001171.5:c.4377C>T
  • NR_147784.1:n.4039C>T
Links:
dbSNP: rs63750763
NCBI 1000 Genomes Browser:
rs63750763
Molecular consequence:
  • NR_147784.1:n.4039C>T - non-coding transcript variant - [Sequence Ontology: SO:0001619]
  • NM_001171.6:c.4377C>T - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_001351800.1:c.4035C>T - synonymous variant - [Sequence Ontology: SO:0001819]

Condition(s)

Name:
Autosomal recessive inherited pseudoxanthoma elasticum (PXE)
Synonyms:
Gronblad Strandberg syndrome
Identifiers:
MONDO: MONDO:0009925; MedGen: C1275116; Orphanet: 758; OMIM: 264800

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000589122PXE International
no assertion criteria provided
Uncertain significance
(Feb 16, 2021)
germlineresearch

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedresearch

Citations

PubMed

ABCC6/MRP6 mutations: further insight into the molecular pathology of pseudoxanthoma elasticum.

Hu X, Plomp A, Wijnholds J, Ten Brink J, van Soest S, van den Born LI, Leys A, Peek R, de Jong PT, Bergen AA.

Eur J Hum Genet. 2003 Mar;11(3):215-24.

PubMed [citation]
PMID:
12673275

Details of each submission

From PXE International, SCV000589122.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedresearch PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Feb 14, 2024