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NM_003002.4(SDHD):c.298_301del (p.Thr100fs) AND Hereditary pheochromocytoma-paraganglioma

Germline classification:
Likely pathogenic (1 submission)
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000505306.9

Allele description [Variation Report for NM_003002.4(SDHD):c.298_301del (p.Thr100fs)]

NM_003002.4(SDHD):c.298_301del (p.Thr100fs)

Gene:
SDHD:succinate dehydrogenase complex subunit D [Gene - OMIM - HGNC]
Variant type:
Deletion
Cytogenetic location:
11q23.1
Genomic location:
Preferred name:
NM_003002.4(SDHD):c.298_301del (p.Thr100fs)
HGVS:
  • NC_000011.10:g.112088995_112088998del
  • NG_012337.3:g.7149_7152del
  • NG_033145.1:g.2804_2807del
  • NM_001276503.2:c.169+1022_169+1025del
  • NM_001276504.2:c.181_184del
  • NM_001276506.2:c.298_301del
  • NM_003002.4:c.298_301delMANE SELECT
  • NP_001263433.1:p.Thr61fs
  • NP_001263435.1:p.Thr100fs
  • NP_002993.1:p.Thr100fs
  • LRG_9t1:c.298_301del
  • LRG_9:g.7149_7152del
  • LRG_9p1:p.Thr100fs
  • NC_000011.9:g.111959716_111959719del
  • NC_000011.9:g.111959719_111959722del
  • NM_003002.2:c.298_301delACTC
  • NR_077060.2:n.333_336del
  • p.T100FFS*34
Protein change:
T100fs
Links:
dbSNP: rs786203067
NCBI 1000 Genomes Browser:
rs786203067
Molecular consequence:
  • NM_001276504.2:c.181_184del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001276506.2:c.298_301del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_003002.4:c.298_301del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001276503.2:c.169+1022_169+1025del - intron variant - [Sequence Ontology: SO:0001627]
  • NR_077060.2:n.333_336del - non-coding transcript variant - [Sequence Ontology: SO:0001619]

Condition(s)

Name:
Hereditary pheochromocytoma-paraganglioma
Synonyms:
Hereditary Paraganglioma-Pheochromocytoma Syndromes; Hereditary Paragangliomas and Pheochromocytomas
Identifiers:
MONDO: MONDO:0017366; MedGen: C1708353

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000599541Section on Medical Neuroendocrinolgy, National Institutes of Health
no assertion criteria provided
Likely pathogenicgermlineresearch

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedresearch

Details of each submission

From Section on Medical Neuroendocrinolgy, National Institutes of Health, SCV000599541.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedresearchnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: May 19, 2024