U.S. flag

An official website of the United States government

NC_000010.11:g.87863176C>T AND not provided

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Mar 19, 2024
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000579057.11

Allele description [Variation Report for NC_000010.11:g.87863176C>T]

NC_000010.11:g.87863176C>T

Genes:
PTEN:phosphatase and tensin homolog [Gene - OMIM - HGNC]
KLLN:killin, p53 regulated DNA replication inhibitor [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
10q23.31
Genomic location:
Preferred name:
NC_000010.11:g.87863176C>T
HGVS:
  • NC_000010.11:g.87863176C>T
  • NG_007466.2:g.4739C>T
  • NG_033079.1:g.5262G>A
  • NM_001126049.2:c.-689G>AMANE SELECT
  • LRG_1087t1:c.-689G>A
  • LRG_311t1:c.-1293C>T
  • LRG_1087:g.5262G>A
  • LRG_311:g.4739C>T
  • NC_000010.10:g.89622933C>T
  • NM_000314.4:c.-1293C>T
Links:
dbSNP: rs1028896102
NCBI 1000 Genomes Browser:
rs1028896102
Molecular consequence:
  • NM_001126049.2:c.-689G>A - 5 prime UTR variant - [Sequence Ontology: SO:0001623]

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV000680560GeneDx
criteria provided, single submitter

(GeneDx Variant Classification Process June 2021)		Uncertain significance
(Mar 19, 2024) 		germlineclinical testing

Citation Link

Help

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From GeneDx, SCV000680560.3

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

Has not been previously published as pathogenic or benign to our knowledge; No data available from control populations to assess the frequency of this variant; Also known as c.-1293C>T

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Nov 10, 2024