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NM_001378452.1(ITPR1):c.7648G>A (p.Gly2550Arg) AND Inborn genetic diseases

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Mar 15, 2016
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000622722.2

Allele description [Variation Report for NM_001378452.1(ITPR1):c.7648G>A (p.Gly2550Arg)]

NM_001378452.1(ITPR1):c.7648G>A (p.Gly2550Arg)

Genes:
LOC126806590:MED14-independent group 3 enhancer GRCh37_chr3:4855759-4856958 [Gene]
ITPR1:inositol 1,4,5-trisphosphate receptor type 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
3p26.1
Genomic location:
Preferred name:
NM_001378452.1(ITPR1):c.7648G>A (p.Gly2550Arg)
HGVS:
  • NC_000003.12:g.4814509G>A
  • NG_016144.1:g.326162G>A
  • NM_001099952.4:c.7504G>A
  • NM_001168272.2:c.7603G>A
  • NM_001378452.1:c.7648G>AMANE SELECT
  • NM_002222.7:c.7459G>A
  • NP_001093422.2:p.Gly2502Arg
  • NP_001161744.1:p.Gly2535Arg
  • NP_001161744.1:p.Gly2535Arg
  • NP_001365381.1:p.Gly2550Arg
  • NP_002213.5:p.Gly2487Arg
  • NC_000003.11:g.4856193G>A
  • NM_001168272.1:c.7603G>A
  • NM_002222.5:c.7459G>A
Protein change:
G2487R
Links:
dbSNP: rs1553757628
NCBI 1000 Genomes Browser:
rs1553757628
Molecular consequence:
  • NM_001099952.4:c.7504G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001168272.2:c.7603G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001378452.1:c.7648G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_002222.7:c.7459G>A - missense variant - [Sequence Ontology: SO:0001583]
Observations:
1

Condition(s)

Name:
Inborn genetic diseases
Identifiers:
MeSH: D030342; MedGen: C0950123

Recent activity

  • CD59A glycoprotein precursor [Mus musculus]
    CD59A glycoprotein precursor [Mus musculus]
    gi|161484616|ref|NP_001104530.1|
    Protein
  • Corpus Striatum
    Corpus Striatum
    Striped GRAY MATTER and WHITE MATTER consisting of the NEOSTRIATUM and paleostriatum (GLOBUS PALLIDUS). It is located in front of and lateral to the THALAMUS in each cerebral ...<br/>Year introduced: 1974(1972)
    MeSH

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000741306Ambry Genetics
criteria provided, single submitter

(Ambry exome assertion method (8-5-2015))
Uncertain significance
(Mar 15, 2016)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
Hispanicgermlineyes1not providednot provided1not providedclinical testing

Details of each submission

From Ambry Genetics, SCV000741306.3

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1Hispanic1not providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyes1not providednot provided1not providednot providednot provided

Last Updated: Oct 8, 2024