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NM_001330288.2(SMARCC2):c.1926+1G>T AND SMARCC2-related disorder

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
May 10, 2017
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000625996.2

Allele description [Variation Report for NM_001330288.2(SMARCC2):c.1926+1G>T]

NM_001330288.2(SMARCC2):c.1926+1G>T

Gene:
SMARCC2:SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
12q13.2
Genomic location:
Preferred name:
NM_001330288.2(SMARCC2):c.1926+1G>T
HGVS:
  • NC_000012.12:g.56172427C>A
  • NG_047081.1:g.22141G>T
  • NM_001130420.3:c.1926+1G>T
  • NM_001330288.2:c.1926+1G>TMANE SELECT
  • NM_003075.5:c.1833+1G>T
  • NM_139067.4:c.1926+1G>T
  • NC_000012.11:g.56566211C>A
  • NM_003075.3:c.1833+1G>T
Links:
dbSNP: rs1555221275
NCBI 1000 Genomes Browser:
rs1555221275
Molecular consequence:
  • NM_001130420.3:c.1926+1G>T - splice donor variant - [Sequence Ontology: SO:0001575]
  • NM_001330288.2:c.1926+1G>T - splice donor variant - [Sequence Ontology: SO:0001575]
  • NM_003075.5:c.1833+1G>T - splice donor variant - [Sequence Ontology: SO:0001575]
  • NM_139067.4:c.1926+1G>T - splice donor variant - [Sequence Ontology: SO:0001575]
Observations:
1

Condition(s)

Name:
SMARCC2-related disorder
Synonyms:
SMARCC2-related condition
Identifiers:

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000746602Undiagnosed Diseases Network, NIH - Undiagnosed Diseases Network (NIH), UDN
criteria provided, single submitter

(ACMG Guidelines, 2015)
Uncertain significance
(May 10, 2017)
unknownclinical testing

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
Whiteunknownyes1not providednot providednot providednot providedclinical testing

Citations

PubMed

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee..

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]
PMID:
25741868
PMCID:
PMC4544753

Details of each submission

From Undiagnosed Diseases Network, NIH - Undiagnosed Diseases Network (NIH), UDN, SCV000746602.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1White1not providednot providedclinical testing
(GTR000553916.1)
PubMed (1)

Description

This individual has been reported in PMID: 30580808 (individual 8).

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownyesnot providednot providednot provided
(GTR000553916.1)
1not providednot providednot provided

Last Updated: May 19, 2024