NM_153676.4(USH1C):c.1739_1744del (p.Pro580_Val581del) AND multiple conditions

Germline classification:: Uncertain significance (1 submission)
Last evaluated:: Jan 10, 2018
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV000672004.1

Allele description [Variation Report for NM_153676.4(USH1C):c.1739_1744del (p.Pro580_Val581del)]

NM_153676.4(USH1C):c.1739_1744del (p.Pro580_Val581del)

Gene:

USH1C:USH1 protein network component harmonin [Gene - OMIM - HGNC]

Variant type:

Deletion

Cytogenetic location:

11p15.1

Genomic location:

Preferred name:

NM_153676.4(USH1C):c.1739_1744del (p.Pro580_Val581del)

HGVS:

NC_000011.10:g.17509627_17509632del
NG_011883.1:g.39787_39792del
NG_011883.2:g.39787_39792del
NM_001297764.2:c.1228-7650_1228-7645del
NM_005709.4:c.1285-7650_1285-7645del
NM_153676.4:c.1739_1744delMANE SELECT
NP_710142.1:p.Pro580_Val581del
NC_000011.9:g.17531174_17531179del
NM_005709.3:c.1285-7650_1285-7645del6

Links:

dbSNP: rs1175090344

NCBI 1000 Genomes Browser:

rs1175090344

Molecular consequence:

NM_153676.4:c.1739_1744del - inframe_deletion - [Sequence Ontology: SO:0001822]
NM_001297764.2:c.1228-7650_1228-7645del - intron variant - [Sequence Ontology: SO:0001627]
NM_005709.4:c.1285-7650_1285-7645del - intron variant - [Sequence Ontology: SO:0001627]

Condition(s)

Name:: Usher syndrome type 1C
Synonyms:: USHER SYNDROME, TYPE I, ACADIAN VARIETY; Usher syndrome, Acadian variety
Identifiers:: MONDO: MONDO:0010171; MedGen: C1848604; Orphanet: 231169; Orphanet: 886; OMIM: 276904

Name:: Autosomal recessive nonsyndromic hearing loss 18A
Synonyms:: Deafness, autosomal recessive 18; Deafness, autosomal recessive 18A
Identifiers:: MONDO: MONDO:0011192; MedGen: C1865870; Orphanet: 90636; OMIM: 602092

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV000797056	Counsyl	criteria provided, single submitter (Counsyl Autosomal Recessive and X-Linked Classification Criteria (2018))	Uncertain significance (Jan 10, 2018)	unknown	clinical testing	Citation Link

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV000797056

Counsyl

criteria provided, single submitter

(Counsyl Autosomal Recessive and X-Linked Classification Criteria (2018))

Uncertain significance
(Jan 10, 2018)

unknown

clinical testing

Citation Link

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	unknown	unknown	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From Counsyl, SCV000797056.1

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	unknown	unknown	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Sep 17, 2022

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