GRCh37/hg19 5p15.33(chr5:113576-348598)x1 AND not provided

Germline classification:: Uncertain significance (1 submission)
Last evaluated:: Aug 23, 2017
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV000682508.1

Allele description [Variation Report for GRCh37/hg19 5p15.33(chr5:113576-348598)x1]

GRCh37/hg19 5p15.33(chr5:113576-348598)x1

Genes:

AHRR:aryl hydrocarbon receptor repressor [Gene - OMIM - HGNC]
CCDC127:coiled-coil domain containing 127 [Gene - HGNC]
LRRC14B:leucine rich repeat containing 14B [Gene - HGNC]
PLEKHG4B:pleckstrin homology and RhoGEF domain containing G4B [Gene - HGNC]
PDCD6:programmed cell death 6 [Gene - OMIM - HGNC]
SDHA:succinate dehydrogenase complex flavoprotein subunit A [Gene - OMIM - HGNC]

Variant type:

copy number loss

Cytogenetic location:

5p15.33

Genomic location:

Chr5: 113576 - 348598 (on Assembly GRCh37)

Preferred name:

GRCh37/hg19 5p15.33(chr5:113576-348598)x1

HGVS:

NC_000005.9:g.(?_113576)_(348598_?)del

Condition(s)

Synonyms:: none provided
Identifiers:: MedGen: CN517202

Recent activity

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Micromonospora sp. S1.4 16S ribosomal RNA gene, partial sequence
Micromonospora sp. S1.4 16S ribosomal RNA gene, partial sequence
gi|534406333|gb|KF447722.1|

Nucleotide
Uncultured Flavobacteriaceae bacterium isolate DGGE gel band S12 16S ribosomal R...
Uncultured Flavobacteriaceae bacterium isolate DGGE gel band S12 16S ribosomal RNA gene, partial sequence
gi|166407773|gb|EU375150.1|

Nucleotide
CD44 antigen isoform 4 precursor [Homo sapiens]
CD44 antigen isoform 4 precursor [Homo sapiens]
gi|48255941|ref|NP_001001391.1|

Protein

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV000810015	Quest Diagnostics Nichols Institute San Juan Capistrano	no assertion criteria provided	Uncertain significance (Aug 23, 2017)	germline	clinical testing

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV000810015

Quest Diagnostics Nichols Institute San Juan Capistrano

no assertion criteria provided

Uncertain significance
(Aug 23, 2017)

germline

clinical testing

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	unknown	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From Quest Diagnostics Nichols Institute San Juan Capistrano, SCV000810015.1

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	unknown	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Apr 23, 2022

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