NM_178014.4(TUBB):c.57+21_57+22del AND not provided

Germline classification:: Likely benign (1 submission)
Last evaluated:: Jun 14, 2018
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV000831942.1

Allele description [Variation Report for NM_178014.4(TUBB):c.57+21_57+22del]

NM_178014.4(TUBB):c.57+21_57+22del

Gene:

TUBB:tubulin beta class I [Gene - OMIM - HGNC]

Variant type:

Deletion

Cytogenetic location:

6p21.33

Genomic location:

Preferred name:

NM_178014.4(TUBB):c.57+21_57+22del

HGVS:

NC_000006.12:g.30720582_30720583del
NC_000006.12:g.30720584_30720585del
NG_034142.1:g.5384_5385del
NM_001293213.2:c.57+21_57+22del
NM_001293214.2:c.34+44_34+45del
NM_178014.4:c.57+21_57+22delMANE SELECT
NC_000006.11:g.30688361_30688362del
NM_178014.3:c.57+19_57+20delTT

Links:

dbSNP: rs557000578

NCBI 1000 Genomes Browser:

rs557000578

Molecular consequence:

NM_001293213.2:c.57+21_57+22del - intron variant - [Sequence Ontology: SO:0001627]
NM_001293214.2:c.34+44_34+45del - intron variant - [Sequence Ontology: SO:0001627]
NM_178014.4:c.57+21_57+22del - intron variant - [Sequence Ontology: SO:0001627]

Condition(s)

Synonyms:: none provided
Identifiers:: MedGen: CN517202

Recent activity

Clear Turn Off Turn On

Human HMGI-C chimeric transcript mRNA, partial cds
Human HMGI-C chimeric transcript mRNA, partial cds
gi|1054886|gb|U28131.1|HSU28131

Nucleotide
photosystem II reaction center protein D1, partial (chloroplast) [Stylonema alsi...
photosystem II reaction center protein D1, partial (chloroplast) [Stylonema alsidii]
gi|2560331259|gb|WLJ86525.1|

Protein
uncharacterized protein FAM241A [Mus musculus]
uncharacterized protein FAM241A [Mus musculus]
gi|28076961|ref|NP_081758.1|

Protein

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

Help

Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV000973696	GeneDx	criteria provided, single submitter (GeneDx Variant Classification (06012015))	Likely benign (Jun 14, 2018)	germline	clinical testing	Citation Link

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV000973696

GeneDx

criteria provided, single submitter

(GeneDx Variant Classification (06012015))

Likely benign
(Jun 14, 2018)

germline

clinical testing

Citation Link

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	yes	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From GeneDx, SCV000973696.1

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

Description

This variant is considered likely benign or benign based on one or more of the following criteria: it is a conservative change, it occurs at a poorly conserved position in the protein, it is predicted to be benign by multiple in silico algorithms, and/or has population frequency not consistent with disease.

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	yes	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Apr 23, 2022

ClinVar

Relating variation to medicine