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GRCh37/hg19 10p14-13(chr10:11435205-12314999)x1 AND not provided

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Dec 20, 2017
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000847381.2

Allele description [Variation Report for GRCh37/hg19 10p14-13(chr10:11435205-12314999)x1]

GRCh37/hg19 10p14-13(chr10:11435205-12314999)x1

Genes:
  • SEC61A2:SEC61 translocon subunit alpha 2 [Gene - OMIM - HGNC]
  • UPF2:UPF2 regulator of nonsense mediated mRNA decay [Gene - OMIM - HGNC]
  • USP6NL:USP6 N-terminal like [Gene - OMIM - HGNC]
  • CDC123:cell division cycle 123 [Gene - OMIM - HGNC]
  • DHTKD1:dehydrogenase E1 and transketolase domain containing 1 [Gene - OMIM - HGNC]
  • ECHDC3:enoyl-CoA hydratase domain containing 3 [Gene - HGNC]
  • NUDT5:nudix hydrolase 5 [Gene - OMIM - HGNC]
  • PROSER2:proline and serine rich 2 [Gene - HGNC]
Variant type:
copy number loss
Cytogenetic location:
10p14-13
Genomic location:
Chr10: 11435205 - 12314999 (on Assembly GRCh37)
Preferred name:
GRCh37/hg19 10p14-13(chr10:11435205-12314999)x1
HGVS:
NC_000010.10:g.(?_11435205)_(12314999_?)del

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: CN517202

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Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV000989503Bionano Laboratories
no assertion criteria provided
Uncertain significance
(Dec 20, 2017) 		unknownclinical testing

Help

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Bionano Laboratories, SCV000989503.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownunknownnot providedBuccalnot providednot providednot providednot providednot provided

Last Updated: Dec 11, 2022