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NM_014251.3(SLC25A13):c.2T>C (p.Met1Thr) AND Citrullinemia type I

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
May 28, 2019
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000987931.3

Allele description [Variation Report for NM_014251.3(SLC25A13):c.2T>C (p.Met1Thr)]

NM_014251.3(SLC25A13):c.2T>C (p.Met1Thr)

Genes:
LOC129998833:ATAC-STARR-seq lymphoblastoid silent region 18384 [Gene]
SLC25A13:solute carrier family 25 member 13 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
7q21.3
Genomic location:
Preferred name:
NM_014251.3(SLC25A13):c.2T>C (p.Met1Thr)
Other names:
p.Met1?
HGVS:
  • NC_000007.14:g.96321955A>G
  • NG_012247.2:g.5193T>C
  • NM_001160210.2:c.2T>C
  • NM_014251.3:c.2T>CMANE SELECT
  • NP_001153682.1:p.Met1Thr
  • NP_055066.1:p.Met1Thr
  • NC_000007.13:g.95951267A>G
  • NM_014251.2:c.2T>C
  • NR_027662.2:n.144T>C
Protein change:
M1T
Links:
dbSNP: rs541276426
NCBI 1000 Genomes Browser:
rs541276426
Molecular consequence:
  • NM_001160210.2:c.2T>C - initiator_codon_variant - [Sequence Ontology: SO:0001582]
  • NM_014251.3:c.2T>C - initiator_codon_variant - [Sequence Ontology: SO:0001582]
  • NM_001160210.2:c.2T>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_014251.3:c.2T>C - missense variant - [Sequence Ontology: SO:0001583]
  • NR_027662.2:n.144T>C - non-coding transcript variant - [Sequence Ontology: SO:0001619]

Condition(s)

Name:
Citrullinemia type I (CTNL1)
Synonyms:
Classic citrullinemia; ASS deficiency; Citrullinemia 1; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0008988; MedGen: C4721769; Orphanet: 247525; OMIM: 215700

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001137425Mendelics
criteria provided, single submitter

(Mendelics Assertion Criteria 2017)
Uncertain significance
(May 28, 2019)
unknownclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Mendelics, SCV001137425.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: May 12, 2024