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NM_001145279.4(OPRM1):c.-55A>T AND Tramadol response

Germline classification:
drug response (1 submission)
Last evaluated:
Apr 28, 2018
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001029209.11

Allele description [Variation Report for NM_001145279.4(OPRM1):c.-55A>T]

NM_001145279.4(OPRM1):c.-55A>T

Gene:
OPRM1:opioid receptor mu 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
6q25.2
Genomic location:
Preferred name:
NM_001145279.4(OPRM1):c.-55A>T
HGVS:
  • NC_000006.12:g.154010964A>T
  • NG_021208.2:g.5464A>T
  • NM_001145279.4:c.-55A>T
  • NM_001145280.4:c.-65A>T
  • NM_001145281.3:c.47+405A>T
  • LRG_1007:g.5464A>T
  • NC_000006.11:g.154332099A>T
Links:
dbSNP: rs1583105979
NCBI 1000 Genomes Browser:
rs1583105979
Molecular consequence:
  • NM_001145279.4:c.-55A>T - 5 prime UTR variant - [Sequence Ontology: SO:0001623]
  • NM_001145280.4:c.-65A>T - 5 prime UTR variant - [Sequence Ontology: SO:0001623]
  • NM_001145281.3:c.47+405A>T - intron variant - [Sequence Ontology: SO:0001627]

Condition(s)

Name:
Tramadol response
Synonyms:
Ultram response
Identifiers:
MedGen: CN078023

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Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV001191995Bruce Budowle Laboratory, University of North Texas Health Science Center
no assertion criteria provided
drug response
(Apr 28, 2018)
Condition: Tramadol response		somaticresearch

Help

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedsomaticyes203not providednot providednot providednot providedresearch

Details of each submission

From Bruce Budowle Laboratory, University of North Texas Health Science Center, SCV001191995.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided203not providednot providedresearchnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1somaticyesnot providednot providednot provided203not providednot providednot provided

Last Updated: Nov 10, 2024