- This record was updated by the submitter. Please see the current version.
NM_003104.6(SORD):c.757del (p.Ala253fs) AND Neuronopathy, distal hereditary motor, autosomal recessive 8
- Germline classification:
- Pathogenic/Likely pathogenic (17 submissions)
- Last evaluated:
- Mar 26, 2024
- Review status:
- 2 stars out of maximum of 4 starscriteria provided, multiple submitters, no conflicts
- Somatic classification
of clinical impact: - None
- Review status:
- (0/4) 0 stars out of maximum of 4 starsno assertion criteria provided
- Somatic classification
of oncogenicity: - None
- Review status:
- (0/4) 0 stars out of maximum of 4 starsno assertion criteria provided
- Record status:
- current
- Accession:
- RCV001194463.29
Allele description
NM_003104.6(SORD):c.757del (p.Ala253fs)
- Gene:
- SORD:sorbitol dehydrogenase [Gene - OMIM - HGNC]
- Variant type:
- Deletion
- Cytogenetic location:
- 15q21.1
- Genomic location:
- Preferred name:
- NM_003104.6(SORD):c.757del (p.Ala253fs)
- Other names:
- p.A253Qfs*27; p.Ala253Glnfs*27
- HGVS:
- NC_000015.10:g.45069023del
- NM_003104.6:c.757delMANE SELECT
- NP_003095.2:p.Ala253fs
- NC_000015.10:g.45069023delG
- NC_000015.9:g.45361221del
- NM_003104.5:c.757del
- NM_003104.5:c.757delG
- NM_003104.6:c.757delGMANE SELECT
- NR_034039.2:n.931del
This HGVS expression did not pass validation- Protein change:
- A253fs
- Links:
- OMIM: 182500.0001; dbSNP: rs55901542
- NCBI 1000 Genomes Browser:
- rs55901542
- Molecular consequence:
- NM_003104.6:c.757del - frameshift variant - [Sequence Ontology: SO:0001589]
- NR_034039.2:n.931del - non-coding transcript variant - [Sequence Ontology: SO:0001619]
- Functional consequence:
- protein truncation [Variation Ontology: 0015]
- Observations:
- 12
Condition(s)
Assertion and evidence details
Submission Accession | Submitter | Review Status (Assertion method) | Clinical Significance (Last evaluated) | Origin | Method | Citations |
---|---|---|---|---|---|---|
SCV001364049 | OMIM | no assertion criteria provided | Pathogenic (Oct 17, 2023) | germline | literature only | |
SCV001737015 | Equipe Genetique des Anomalies du Developpement, Université de Bourgogne | criteria provided, single submitter (ACMG Guidelines, 2015) | Likely pathogenic | inherited | clinical testing | |
SCV001760348 | Genomics England Pilot Project, Genomics England | no assertion criteria provided (ACGS Guidelines, 2016) | Likely pathogenic | germline | clinical testing | |
SCV001827226 | Undiagnosed Diseases Network, NIH - Undiagnosed Diseases Network (NIH), UDN | no assertion criteria provided | Uncertain significance (Jul 15, 2022) | unknown | clinical testing | |
SCV002020777 | Revvity Omics, Revvity | criteria provided, single submitter (ACMG Guidelines, 2015) | Pathogenic (Dec 27, 2023) | germline | clinical testing | |
SCV002041655 | Women's Health and Genetics/Laboratory Corporation of America, LabCorp | criteria provided, single submitter (LabCorp Variant Classification Summary - May 2015) | Pathogenic (Nov 16, 2021) | germline | clinical testing | |
SCV002058953 | 3billion | criteria provided, single submitter (ACMG Guidelines, 2015) | Pathogenic (Jan 3, 2022) | germline | clinical testing | PubMed (1) PMID:32367058, |
SCV002576404 | Institute of Human Genetics, University of Leipzig Medical Center | criteria provided, single submitter (ACMG Guidelines, 2015) | Pathogenic (Nov 16, 2023) | paternal | clinical testing | |
SCV002581404 | MGZ Medical Genetics Center | criteria provided, single submitter (ACMG Guidelines, 2015) | Pathogenic (Jun 28, 2022) | germline | clinical testing | |
SCV002583442 | Clinical Genetics Laboratory, University Hospital Schleswig-Holstein | no assertion criteria provided | Pathogenic (May 2, 2022) | germline | clinical testing | |
SCV002768053 | Victorian Clinical Genetics Services, Murdoch Childrens Research Institute
| criteria provided, single submitter (ACMG Guidelines, 2015) | Pathogenic (Feb 2, 2022) | germline | clinical testing | |
SCV003807286 | Laboratorio de Genetica e Diagnostico Molecular, Hospital Israelita Albert Einstein | criteria provided, single submitter (ACMG Guidelines, 2015) | Pathogenic (Mar 30, 2022) | germline | clinical testing | |
SCV004046250 | Rady Children's Institute for Genomic Medicine, Rady Children's Hospital San Diego | criteria provided, single submitter (ACMG Guidelines, 2015) | Pathogenic | germline | clinical testing | |
SCV004171966 | Neuberg Centre For Genomic Medicine, NCGM | criteria provided, single submitter (ACMG Guidelines, 2015) | Likely pathogenic | germline | clinical testing | |
SCV004175344 | Genetics and Molecular Pathology, SA Pathology
| criteria provided, single submitter (ACMG Guidelines, 2015) | Pathogenic (Oct 17, 2022) | germline | clinical testing | |
SCV004803217 | Institute of Immunology and Genetics Kaiserslautern | criteria provided, single submitter (ACMG Guidelines, 2015) | Pathogenic (Mar 6, 2024) | germline | clinical testing | |
SCV004806857 | Center for Genomic Medicine, King Faisal Specialist Hospital and Research Center | criteria provided, single submitter (ACMG Guidelines, 2015) | Likely pathogenic (Mar 26, 2024) | germline | clinical testing |
Summary from all submissions
Ethnicity | Origin | Affected | Individuals | Families | Chromosomes tested | Number Tested | Family history | Method |
---|---|---|---|---|---|---|---|---|
not provided | germline | yes | 11 | not provided | not provided | 2 | not provided | clinical testing |
not provided | germline | not provided | not provided | not provided | not provided | not provided | not provided | literature only |
not provided | germline | unknown | not provided | not provided | not provided | not provided | not provided | clinical testing |
not provided | inherited | yes | not provided | not provided | not provided | not provided | not provided | clinical testing |
not provided | paternal | yes | not provided | not provided | not provided | not provided | not provided | clinical testing |
not provided | unknown | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Citations
PubMed
Liu X, He J, Yilihamu M, Duan X, Fan D.
Front Neurol. 2021;12:733926. doi: 10.3389/fneur.2021.733926.
- PMID:
- 34819907
- PMCID:
- PMC8607551
Biallelic SORD pathogenic variants cause Chinese patients with distal hereditary motor neuropathy.
Dong HL, Li JQ, Liu GL, Yu H, Wu ZY.
NPJ Genom Med. 2021 Jan 4;6(1):1. doi: 10.1038/s41525-020-00165-6.
- PMID:
- 33397963
- PMCID:
- PMC7782788
Details of each submission
From OMIM, SCV001364049.4
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | literature only | PubMed (2) |
Description
In affected individuals from 30 unrelated families with autosomal recessive distal hereditary motor neuronopathy-8 (HMNR8; 618912), also known as SORD deficiency with peripheral neuropathy (SORDD), Cortese et al. (2020) identified a homozygous 1-bp deletion (c.757delG, NM_003104.6) in exon 7 of the SORD gene, predicted to result in a frameshift and premature termination (Ala253GlnfsTer27) in the tetramer interface of the protein. Segregation of the variant was confirmed in only a few families in which the affected offspring inherited the variants from heterozygous unaffected parents, and only a few families had more than 1 affected individual. The mutation was found by whole-exome or whole-genome sequencing and confirmed by Sanger sequencing. The variant was present in 623 of 142,588 genomes in the gnomAD database (frequency of 0.004). Cortese et al. (2020) noted that SORD has a nonfunctional highly homologous paralog, the pseudogene SORD2 or SORD2P: the c.757delG variant is present in SORD2 in over 95% of control chromosomes. The authors used Sanger sequencing to confirm that the c.757delG mutation identified in their patients occurred in the SORD gene. Fibroblasts derived from 4 patients who were homozygous for the c.757delG variant showed absence of the SORD protein and a 10-fold increase in intracellular sorbitol compared to controls. Treatment of patient fibroblasts with aldose reductase inhibitors reduced intracellular sorbitol levels. Additional functional studies of the specific variants were not performed. Serum levels of sorbitol were over 100 times higher in 10 patients with the homozygous variant compared to controls. Eight additional patients, including 2 sibs (family 14), with a similar phenotype were compound heterozygous for c.757delG and another SORD variant. The other alleles included R299X (182500.0002), R110P, R100X, A153D, V322I, L10F, and an intragenic deletion (c.316_425+165del). Familial segregation of these variants could be demonstrated in only 2 patients (patients 4 and 37); familial segregation could not be conclusively demonstrated in the other patients. Several of these variants were present in the gnomAD database at a low frequency (less than 0.0001). All patients were ascertained from 3 large cohorts totaling about 1,000 individuals with peripheral neuropathy who underwent whole-exome or whole-genome sequencing.
In 2 unrelated Chinese patients (patients 1 and 2) with SORDD, Liu et al. (2021) identified homozygosity for the c.757delG mutation in the SORD gene. The mutation, which was identified by whole-exome sequencing, was identified in the carrier state in both sets of parents. The mutation was present at a frequency of 0.0046 in 650 Han Chinese healthy individuals and at a frequency of 0.002 in the Asian population in the gnomAD database (v3.0); it was not present in the 1000 Genomes Project database. In 3 additional unrelated Chinese patients with SORDD, Liu et al. (2021) identified compound heterozygosity for the c.757delG mutation with another mutation in the SORD gene: a c.776C-T transition, resulting in an ala259-to-val (A259V; 182500.0003) substitution, in patient 3; a c.731C-T transition, resulting in a pro244-to-leu (182500.0004) substitution, in patient 4; and a c.851T-C transition, resulting in a leu284-to-pro (L284P; 182500.0005) substitution, in patient 5. The parents in each case were carriers. The missense variants in patients 3, 4, and 5 occurred at highly conserved residues and had a minor allele frequency of less than 0.00001 in gnomAD (v3.0). All 3 variants were classified as likely pathogenic according to ACMG guidelines.
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | not provided | not provided | not provided | not provided | not provided | not provided | not provided | not provided |
From Equipe Genetique des Anomalies du Developpement, Université de Bourgogne, SCV001737015.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | clinical testing | PubMed (1) |
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | inherited | yes | not provided | not provided | not provided | not provided | not provided | not provided | not provided |
From Genomics England Pilot Project, Genomics England, SCV001760348.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | clinical testing | not provided |
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | yes | not provided | not provided | not provided | not provided | not provided | not provided | not provided |
From Undiagnosed Diseases Network, NIH - Undiagnosed Diseases Network (NIH), UDN, SCV001827226.2
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | 1 | not provided | not provided | clinical testing | not provided |
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | unknown | yes | not provided | Blood | not provided | 1 | not provided | not provided | not provided |
From Revvity Omics, Revvity, SCV002020777.3
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | clinical testing | PubMed (1) |
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | unknown | not provided | not provided | not provided | not provided | not provided | not provided | not provided |
From Women's Health and Genetics/Laboratory Corporation of America, LabCorp, SCV002041655.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | clinical testing | PubMed (4) |
Description
Variant summary: SORD c.757delG (p.Ala253GlnfsX27) results in a premature termination codon, predicted to cause a truncation of the encoded protein or absence of the protein due to nonsense mediated decay (NMD), which are commonly known mechanisms for disease. The variant allele was found at a frequency of 0.00041 in 277146 control chromosomes in the gnomAD v2.1.1 database, including 1 homozygote. However, this observation needs to be cautiously considered due to the possibility of the SORD pseudogene being captured. c.757delG has been reported in the literature in multiple homozygous and compound heterozygous individuals affected with hereditary neuropathy (e.g. Cortese_2020, Xie_2020, Dong_2021, Lassuthova_2021). These data indicate that the variant is very likely to be associated with disease. Experimental evidence demonstrated the variant causes a significant reduction in SORD mRNA expression levels and protein levels, indicating a NMD mechanism and loss of function of the SORD gene (Cortese_2020, Dong_2021). Six ClinVar submitters (evaluation after 2014) cite the variant as pathogenic. Based on the evidence outlined above, the variant was classified as pathogenic.
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | unknown | not provided | not provided | not provided | not provided | not provided | not provided | not provided |
From 3billion, SCV002058953.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | 1 | not provided | not provided | clinical testing | PubMed (1) |
Description
Frameshift: predicted to result in a loss or disruption of normal protein function through nonsense-mediated decay (NMD) or protein truncation. Multiple pathogenic variants are reported downstream of the variant (PVS1_VS). Functional studies provide strong evidence of the variant having a damaging effect on the gene or gene product (PMID: 32367058, PS3_S). The variant has been reported at least twice as pathogenic/likely pathogenic with clinical assertions and evidence for the classification (ClinVar ID: VCV000929258, PMID:32367058, 3billion dataset). It is observed at an extremely low frequency in the gnomAD v2.1.1 dataset (total allele frequency: 0.000415, PM2_M). The variant has been reported to be in trans with a pathogenic variant as either compound heterozygous or homozygous in at least one similarly affected unrelated individual (PMID: 32367058, PM3_M). Therefore, this variant is classified as pathogenic according to the recommendation of ACMG/AMP guideline.
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | yes | 1 | not provided | not provided | 1 | not provided | not provided | not provided |
From Institute of Human Genetics, University of Leipzig Medical Center, SCV002576404.2
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | clinical testing | PubMed (1) |
Description
Criteria applied: PVS1,PM3_VSTR,PS3,PP4; Identified as compund heterozygous with NM_003104.6:c.50C>T
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | paternal | yes | not provided | not provided | not provided | not provided | not provided | not provided | not provided |
From MGZ Medical Genetics Center, SCV002581404.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | 9 | not provided | not provided | clinical testing | PubMed (1) |
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | yes | not provided | not provided | not provided | 9 | not provided | not provided | not provided |
From Clinical Genetics Laboratory, University Hospital Schleswig-Holstein, SCV002583442.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | clinical testing | not provided |
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | yes | not provided | not provided | not provided | not provided | not provided | not provided | not provided |
From Victorian Clinical Genetics Services, Murdoch Childrens Research Institute, SCV002768053.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | clinical testing | PubMed (3) |
Description
Based on the classification scheme VCGS_Germline_v1.3.4, this variant is classified as Pathogenic. Following criteria are met: 0102 - Loss of function is a known mechanism of disease in this gene and is associated with sorbitol dehydrogenase deficiency with peripheral neuropathy (MIM#618912). (I) 0106 - This gene is associated with autosomal recessive disease. (I) 0201 - Variant is predicted to cause nonsense-mediated decay (NMD) and loss of protein (premature termination codon is located at least 54 nucleotides upstream of the final exon-exon junction). (SP) 0252 - This variant is homozygous. (I) 0304 - Variant is present in gnomAD (v3) <0.01 for a recessive condition (661 heterozygotes, 1 homozygote). (SP) 0703 - Other NMD-predicted variants comparable to the one identified in this case have moderate previous evidence for pathogenicity. At least four others have been reported so far (ClinVar, PMID: 32367058, 33875678). (SP) 0801 - This variant has strong previous evidence of pathogenicity in unrelated individuals. This variant has been reported as pathogenic (ClinVar) and reported in over thirty unrelated families with hereditary neuropathy (PMID: 32367058). (SP) 1209 - This variant has been shown to be both maternally and paternally inherited (biallelic) (LABID). (I) Legend: (SP) - Supporting pathogenic, (I) - Information, (SB) - Supporting benign
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | unknown | not provided | not provided | not provided | not provided | not provided | not provided | not provided |
From Laboratorio de Genetica e Diagnostico Molecular, Hospital Israelita Albert Einstein, SCV003807286.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | 1 | not provided | not provided | clinical testing | PubMed (1) |
Description
ACMG classification criteria: PVS1 very strong, PS3 supporting, PM3 strong, PP1 moderated
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | yes | 1 | not provided | not provided | 1 | not provided | not provided | not provided |
From Rady Children's Institute for Genomic Medicine, Rady Children's Hospital San Diego, SCV004046250.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | clinical testing | PubMed (1) |
Description
This frameshifting variant in exon 7 of 9 introduces a premature stop codon and is therefore predicted to result in loss of normal protein function through either protein truncation or nonsense-mediated mRNA decay (NMD). This variant has been previously reported as a compound heterozygous and homozygous change in patients with sorbitol dehydrogenase deficiency with peripheral neuropathy (PMID: 32367057, 32367058, 33381078, 33314640). The c.757del (p.Ala253GlnfsTer27) variant is present in the heterozygous state in the gnomAD population database at a frequency of 0.041% (115/277146) and in the homozygous state in 1 individual. Experimental studies showed that this variant reduces SORD mRNA expression and protein levels (PMID: 33397963, 32367058). Based on the available evidence, the c.757del (p.Ala253GlnfsTer27) variant is classified as Pathogenic.
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | yes | not provided | not provided | not provided | not provided | not provided | not provided | not provided |
From Neuberg Centre For Genomic Medicine, NCGM, SCV004171966.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | clinical testing | PubMed (1) |
Description
The frameshift c.757del(p.Ala253GlnfsTer27) variant in SORD gene has been reported previously in homozygous and compound heterozygous state in patients affected with neuropathy (Laššuthová, P., et al.,2021; Liu X, et. al.,2021). Functional studies provide strong evidence of the variant having a damaging effect on the gene or gene product (Cortese A, et. al.,2020). The p.Ala253GlnfsTer27 variant is reported with an allele frequency of 0.008% in the gnomAD exomes database and is novel (not in any individuals) in 1000 Genomes database. This variant has been reported to the ClinVar database as Uncertain significance/ Likely pathogenic/ Pathogenic (multiple submission). This variant causes a frameshift starting with codon Alanine 253, changes this amino acid to Glutamine residue, and creates a premature Stop codon at position 27 of the new reading frame, denoted p.Ala253GlnfsTer27. This variant is predicted to cause loss of normal protein function through protein truncation. Loss of function variants have been previously reported to be disease causing. For these reasons, this variant has been classified as Pathogenic.
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | yes | not provided | not provided | not provided | not provided | not provided | not provided | not provided |
From Genetics and Molecular Pathology, SA Pathology, SCV004175344.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | clinical testing | PubMed (4) |
Description
The SORD c.757del variant is classified as PATHOGENIC (PVS1, PS2, PS3, PS4) This SORD c.757del variant is located in exon 7/9 and is predicted to cause a shift in the reading frame at codon 253. This variant has been identified as a de novo variant in this patient (PS2). This recurrent variant has been reported in multiple probands with a clinical presentation of hereditary neuropathy in both homozygous and compound heterozygous state (PMID:32367058; PMID:33875678; PMID:33381078). (PS4, PM3). Functional studies have shown a significant reduction in SORD mRNA and protein levels (PMID:32367058) (PS3). This variant has been reported in dbSNP (rs55901542) and in the HGMD database: CD2011533. It has been reported as Pathogenic/Likely pathogenic by other diagnostic laboratories (ClinVar Variation ID: 929258).
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | yes | not provided | not provided | not provided | not provided | not provided | not provided | not provided |
From Institute of Immunology and Genetics Kaiserslautern, SCV004803217.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | clinical testing | PubMed (1) |
Description
ACMG Criteria: PVS1, PM3, PP4, PP5; Variant was found in heterozygous state
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | yes | not provided | not provided | not provided | not provided | not provided | not provided | not provided |
From Center for Genomic Medicine, King Faisal Specialist Hospital and Research Center, SCV004806857.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | clinical testing | PubMed (1) |
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | unknown | not provided | not provided | not provided | not provided | not provided | not provided | not provided |
Last Updated: May 12, 2024