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NM_032968.5(PCDH11X):c.1656C>G (p.Ser552Arg) AND not provided

Germline classification:
Uncertain significance (2 submissions)
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001528722.3

Allele description [Variation Report for NM_032968.5(PCDH11X):c.1656C>G (p.Ser552Arg)]

NM_032968.5(PCDH11X):c.1656C>G (p.Ser552Arg)

Gene:
PCDH11X:protocadherin 11 X-linked [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
Xq21.31
Genomic location:
Preferred name:
NM_032968.5(PCDH11X):c.1656C>G (p.Ser552Arg)
HGVS:
  • NC_000023.11:g.91877896C>G
  • NG_016251.1:g.103636C>G
  • NM_001168360.1:c.1656C>G
  • NM_001168361.1:c.1656C>G
  • NM_001168362.1:c.1656C>G
  • NM_001168363.1:c.1656C>G
  • NM_032968.5:c.1656C>GMANE SELECT
  • NM_032969.4:c.1656C>G
  • NP_001161832.1:p.Ser552Arg
  • NP_001161833.1:p.Ser552Arg
  • NP_001161834.1:p.Ser552Arg
  • NP_001161835.1:p.Ser552Arg
  • NP_116750.1:p.Ser552Arg
  • NP_116751.1:p.Ser552Arg
  • NC_000023.10:g.91132895C>G
Protein change:
S552R
Links:
dbSNP: rs1190053024
NCBI 1000 Genomes Browser:
rs1190053024
Molecular consequence:
  • NM_001168360.1:c.1656C>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001168361.1:c.1656C>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001168362.1:c.1656C>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001168363.1:c.1656C>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_032968.5:c.1656C>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_032969.4:c.1656C>G - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001740944Diagnostic Laboratory, Department of Genetics, University Medical Center Groningen - VKGL Data-share Consensus
no assertion criteria provided
Uncertain significancegermlineclinical testing

SCV001965964Clinical Genetics DNA and cytogenetics Diagnostics Lab, Erasmus MC, Erasmus Medical Center - VKGL Data-share Consensus

See additional submitters

no assertion criteria provided
Uncertain significancegermlineclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Diagnostic Laboratory, Department of Genetics, University Medical Center Groningen - VKGL Data-share Consensus, SCV001740944.3

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

From Clinical Genetics DNA and cytogenetics Diagnostics Lab, Erasmus MC, Erasmus Medical Center - VKGL Data-share Consensus, SCV001965964.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Dec 24, 2023