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NM_005677.4(COLQ):c.1346C>T (p.Thr449Met) AND not provided

Germline classification:
Uncertain significance (2 submissions)
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001529990.3

Allele description [Variation Report for NM_005677.4(COLQ):c.1346C>T (p.Thr449Met)]

NM_005677.4(COLQ):c.1346C>T (p.Thr449Met)

Gene:
COLQ:collagen like tail subunit of asymmetric acetylcholinesterase [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
3p25.1
Genomic location:
Preferred name:
NM_005677.4(COLQ):c.1346C>T (p.Thr449Met)
HGVS:
  • NC_000003.12:g.15451666G>A
  • NG_009032.2:g.75086C>T
  • NM_005677.4:c.1346C>TMANE SELECT
  • NM_080538.2:c.1316C>T
  • NM_080539.4:c.1244C>T
  • NP_005668.2:p.Thr449Met
  • NP_536799.1:p.Thr439Met
  • NP_536800.2:p.Thr415Met
  • NC_000003.11:g.15493173G>A
Protein change:
T415M
Links:
dbSNP: rs1015425548
NCBI 1000 Genomes Browser:
rs1015425548
Molecular consequence:
  • NM_005677.4:c.1346C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_080538.2:c.1316C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_080539.4:c.1244C>T - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001744431Diagnostic Laboratory, Department of Genetics, University Medical Center Groningen - VKGL Data-share Consensus
no assertion criteria provided
Uncertain significancegermlineclinical testing

SCV001800345Laboratory of Diagnostic Genome Analysis, Leiden University Medical Center (LUMC) - VKGL Data-share Consensus
no assertion criteria provided
Uncertain significancegermlineclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Diagnostic Laboratory, Department of Genetics, University Medical Center Groningen - VKGL Data-share Consensus, SCV001744431.3

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

From Laboratory of Diagnostic Genome Analysis, Leiden University Medical Center (LUMC) - VKGL Data-share Consensus, SCV001800345.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Dec 24, 2023