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NM_024915.4(GRHL2):c.-24C>G AND Nail and teeth abnormalities-marginal palmoplantar keratoderma-oral hyperpigmentation syndrome

Germline classification:
Benign (1 submission)
Last evaluated:
Aug 10, 2021
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001702810.2

Allele description [Variation Report for NM_024915.4(GRHL2):c.-24C>G]

NM_024915.4(GRHL2):c.-24C>G

Gene:
GRHL2:grainyhead like transcription factor 2 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
8q22.3
Genomic location:
Preferred name:
NM_024915.4(GRHL2):c.-24C>G
HGVS:
  • NC_000008.11:g.101492746C>G
  • NG_011971.2:g.5307C>G
  • NM_001330593.2:c.-132C>G
  • NM_024915.4:c.-24C>GMANE SELECT
  • NC_000008.10:g.102504974C>G
  • NG_011971.1:g.5307C>G
  • NM_024915.3:c.-24C>G
Links:
dbSNP: rs515622
NCBI 1000 Genomes Browser:
rs515622
Molecular consequence:
  • NM_001330593.2:c.-132C>G - 5 prime UTR variant - [Sequence Ontology: SO:0001623]
  • NM_024915.4:c.-24C>G - 5 prime UTR variant - [Sequence Ontology: SO:0001623]

Condition(s)

Name:
Nail and teeth abnormalities-marginal palmoplantar keratoderma-oral hyperpigmentation syndrome
Synonyms:
Ectodermal dysplasia/short stature syndrome
Identifiers:
MONDO: MONDO:0014460; MedGen: C4014987; Orphanet: 423454; OMIM: 616029

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Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV001933944Genome-Nilou Lab
criteria provided, single submitter

(ACMG Guidelines, 2015)		Benign
(Aug 10, 2021) 		germlineclinical testing

PubMed (1)
[See all records that cite this PMID]

Help

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlinenonot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee..

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]
PMID:
25741868
PMCID:
PMC4544753

Details of each submission

From Genome-Nilou Lab, SCV001933944.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlinenonot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024