NM_006258.4(PRKG1):c.319G>C (p.Asp107His) AND not provided

Germline classification:: Uncertain significance (1 submission)
Last evaluated:: Feb 8, 2019
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV001755915.2

Allele description [Variation Report for NM_006258.4(PRKG1):c.319G>C (p.Asp107His)]

NM_006258.4(PRKG1):c.319G>C (p.Asp107His)

Gene:

PRKG1:protein kinase cGMP-dependent 1 [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

10q21.1

Genomic location:

Preferred name:

NM_006258.4(PRKG1):c.319G>C (p.Asp107His)

HGVS:

NC_000010.11:g.51153171G>C
NG_029982.1:g.167021G>C
NM_001098512.3:c.274G>C
NM_006258.4:c.319G>CMANE SELECT
NP_001091982.1:p.Asp92His
NP_006249.1:p.Asp107His
LRG_1135t1:c.319G>C
LRG_1135t2:c.274G>C
LRG_1135:g.167021G>C
LRG_1135p1:p.Asp107His
LRG_1135p2:p.Asp92His
NC_000010.10:g.52912931G>C
NM_006258.3:c.319G>C

Protein change:

D107H

Links:

dbSNP: rs751916382

NCBI 1000 Genomes Browser:

rs751916382

Molecular consequence:

NM_001098512.3:c.274G>C - missense variant - [Sequence Ontology: SO:0001583]
NM_006258.4:c.319G>C - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:: none provided
Identifiers:: MedGen: C3661900

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Flammulina velutipes var. lupinicola culture CBS:101091 strain CBS 101091 small ...
Flammulina velutipes var. lupinicola culture CBS:101091 strain CBS 101091 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence
gi|1473249777|gb|MH862721.1|

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Flammulina velutipes strain F7214 internal transcribed spacer 2 and large subuni...
Flammulina velutipes strain F7214 internal transcribed spacer 2 and large subunit ribosomal RNA gene, partial sequence
gi|2507818284|gb|OR005070.1|

Nucleotide

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV001987909	GeneDx	criteria provided, single submitter (GeneDx Variant Classification Process June 2021)	Uncertain significance (Feb 8, 2019)	germline	clinical testing	Citation Link

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV001987909

GeneDx

criteria provided, single submitter

(GeneDx Variant Classification Process June 2021)

Uncertain significance
(Feb 8, 2019)

germline

clinical testing

Citation Link

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	yes	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From GeneDx, SCV001987909.2

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

Description

Not observed at a significant frequency in large population cohorts (Lek et al., 2016).; In silico analysis, which includes protein predictors and evolutionary conservation, supports that this variant does not alter protein structure/function; D107H reported as a variant of uncertain significance by another laboratory in ClinVar (SCV000659233.1; Landrum et al., 2016).; The D107H variant has not been published as pathogenic or been reported as benign to our knowledge.

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	yes	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Sep 29, 2024

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