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NM_002429.6(MMP19):c.84T>C (p.Pro28=) AND Familial cavitary optic disk anomaly

Germline classification:
Benign (1 submission)
Last evaluated:
Sep 5, 2021
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001775526.2

Allele description [Variation Report for NM_002429.6(MMP19):c.84T>C (p.Pro28=)]

NM_002429.6(MMP19):c.84T>C (p.Pro28=)

Gene:
MMP19:matrix metallopeptidase 19 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
12q13.2
Genomic location:
Preferred name:
NM_002429.6(MMP19):c.84T>C (p.Pro28=)
HGVS:
  • NC_000012.12:g.55842747A>G
  • NG_042870.1:g.5237=
  • NM_001272101.2:c.84T>C
  • NM_002429.6:c.84T>CMANE SELECT
  • NP_001259030.1:p.Pro28=
  • NP_002420.1:p.Pro28=
  • NC_000012.11:g.56236531A>G
  • NR_073606.2:n.190T>C
Links:
dbSNP: rs7294345
NCBI 1000 Genomes Browser:
rs7294345
Molecular consequence:
  • NR_073606.2:n.190T>C - non-coding transcript variant - [Sequence Ontology: SO:0001619]
  • NM_001272101.2:c.84T>C - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_002429.6:c.84T>C - synonymous variant - [Sequence Ontology: SO:0001819]

Condition(s)

Name:
Familial cavitary optic disk anomaly
Synonyms:
Cavitary optic disc anomalies; Cavitary optic disc anomaly; Familial cavitary optic disc anomaly
Identifiers:
MONDO: MONDO:0012687; MedGen: C1969063; OMIM: 611543

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Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV002014238Genome-Nilou Lab
criteria provided, single submitter

(ACMG Guidelines, 2015)		Benign
(Sep 5, 2021) 		germlineclinical testing

PubMed (1)
[See all records that cite this PMID]

Help

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlinenonot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee..

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]
PMID:
25741868
PMCID:
PMC4544753

Details of each submission

From Genome-Nilou Lab, SCV002014238.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlinenonot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024