NM_001348800.3(ZBTB20):c.154A>G (p.Thr52Ala) AND not specified

Germline classification:: Benign (1 submission)
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV001796815.1

Allele description [Variation Report for NM_001348800.3(ZBTB20):c.154A>G (p.Thr52Ala)]

NM_001348800.3(ZBTB20):c.154A>G (p.Thr52Ala)

Genes:

ZBTB20-AS1:ZBTB20 antisense RNA 1 [Gene - HGNC]
ZBTB20:zinc finger and BTB domain containing 20 [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

3q13.31

Genomic location:

Preferred name:

NM_001348800.3(ZBTB20):c.154A>G (p.Thr52Ala)

HGVS:

NC_000003.12:g.114380262T>C
NG_052992.1:g.772019A>G
NM_001164342.2:c.154A>G
NM_001164343.2:c.-66A>G
NM_001164344.4:c.-66A>G
NM_001164345.4:c.-66A>G
NM_001164346.2:c.-66A>G
NM_001164347.2:c.-66A>G
NM_001348800.3:c.154A>GMANE SELECT
NM_001348801.3:c.-66A>G
NM_001348802.3:c.-66A>G
NM_001348803.3:c.154A>G
NM_001348804.3:c.-66A>G
NM_001348805.3:c.-66A>G
NM_001393393.1:c.154A>G
NM_001393394.1:c.154A>G
NM_001393395.1:c.-66A>G
NM_001393396.1:c.-66A>G
NM_015642.7:c.-66A>G
NP_001157814.1:p.Thr52Ala
NP_001335729.1:p.Thr52Ala
NP_001335732.1:p.Thr52Ala
NP_001380322.1:p.Thr52Ala
NP_001380323.1:p.Thr52Ala
NC_000003.11:g.114099109T>C
NC_000003.11:g.114099109T>C
NR_121662.3:n.424A>G

Protein change:

T52A

Links:

dbSNP: rs72950611

NCBI 1000 Genomes Browser:

rs72950611

Molecular consequence:

NM_001164343.2:c.-66A>G - 5 prime UTR variant - [Sequence Ontology: SO:0001623]
NM_001164344.4:c.-66A>G - 5 prime UTR variant - [Sequence Ontology: SO:0001623]
NM_001164345.4:c.-66A>G - 5 prime UTR variant - [Sequence Ontology: SO:0001623]
NM_001164346.2:c.-66A>G - 5 prime UTR variant - [Sequence Ontology: SO:0001623]
NM_001164347.2:c.-66A>G - 5 prime UTR variant - [Sequence Ontology: SO:0001623]
NM_001348801.3:c.-66A>G - 5 prime UTR variant - [Sequence Ontology: SO:0001623]
NM_001348802.3:c.-66A>G - 5 prime UTR variant - [Sequence Ontology: SO:0001623]
NM_001348804.3:c.-66A>G - 5 prime UTR variant - [Sequence Ontology: SO:0001623]
NM_001348805.3:c.-66A>G - 5 prime UTR variant - [Sequence Ontology: SO:0001623]
NM_001393395.1:c.-66A>G - 5 prime UTR variant - [Sequence Ontology: SO:0001623]
NM_001393396.1:c.-66A>G - 5 prime UTR variant - [Sequence Ontology: SO:0001623]
NM_015642.7:c.-66A>G - 5 prime UTR variant - [Sequence Ontology: SO:0001623]
NM_001164342.2:c.154A>G - missense variant - [Sequence Ontology: SO:0001583]
NM_001348800.3:c.154A>G - missense variant - [Sequence Ontology: SO:0001583]
NM_001348803.3:c.154A>G - missense variant - [Sequence Ontology: SO:0001583]
NM_001393393.1:c.154A>G - missense variant - [Sequence Ontology: SO:0001583]
NM_001393394.1:c.154A>G - missense variant - [Sequence Ontology: SO:0001583]
NR_121662.3:n.424A>G - non-coding transcript variant - [Sequence Ontology: SO:0001619]

Condition(s)

Synonyms:: AllHighlyPenetrant
Identifiers:: MedGen: CN169374

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV002038476	Clinical Genetics DNA and cytogenetics Diagnostics Lab, Erasmus MC, Erasmus Medical Center - VKGL Data-share Consensus See additional submitters Diagnostic Laboratory, Department of Genetics, University Medical Center Groningen	no assertion criteria provided	Benign	germline	clinical testing

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV002038476

Clinical Genetics DNA and cytogenetics Diagnostics Lab, Erasmus MC, Erasmus Medical Center - VKGL Data-share Consensus

See additional submitters

no assertion criteria provided

Benign

germline

clinical testing

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	yes	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From Clinical Genetics DNA and cytogenetics Diagnostics Lab, Erasmus MC, Erasmus Medical Center - VKGL Data-share Consensus, SCV002038476.1

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	yes	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Mar 16, 2024

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