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NM_000755.5(CRAT):c.817C>T (p.Arg273Trp) AND Neurodegeneration with brain iron accumulation 8

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
May 29, 2020
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001836999.1

Allele description [Variation Report for NM_000755.5(CRAT):c.817C>T (p.Arg273Trp)]

NM_000755.5(CRAT):c.817C>T (p.Arg273Trp)

Gene:
CRAT:carnitine O-acetyltransferase [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
9q34.11
Genomic location:
Preferred name:
NM_000755.5(CRAT):c.817C>T (p.Arg273Trp)
HGVS:
  • NC_000009.12:g.129100678G>A
  • NM_000755.5:c.817C>TMANE SELECT
  • NM_001257363.3:c.754C>T
  • NM_001346546.2:c.820C>T
  • NM_001346547.2:c.817C>T
  • NM_001346548.2:c.754C>T
  • NM_001346549.2:c.697C>T
  • NM_004003.4:c.754C>T
  • NP_000746.3:p.Arg273Trp
  • NP_001244292.2:p.Arg252Trp
  • NP_001333475.2:p.Arg274Trp
  • NP_001333476.2:p.Arg273Trp
  • NP_001333477.2:p.Arg252Trp
  • NP_001333478.2:p.Arg233Trp
  • NP_003994.3:p.Arg252Trp
  • NC_000009.11:g.131862957G>A
Protein change:
R233W
Links:
dbSNP: rs141122671
NCBI 1000 Genomes Browser:
rs141122671
Molecular consequence:
  • NM_000755.5:c.817C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001257363.3:c.754C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001346546.2:c.820C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001346547.2:c.817C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001346548.2:c.754C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001346549.2:c.697C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_004003.4:c.754C>T - missense variant - [Sequence Ontology: SO:0001583]
Observations:
1

Condition(s)

Name:
Neurodegeneration with brain iron accumulation 8
Identifiers:
MONDO: MONDO:0054764; MedGen: C4693587; OMIM: 617917

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV002097646New York Genome Center - CSER-NYCKidSeq
criteria provided, single submitter

(NYGC Assertion Criteria 2020)
Uncertain significance
(May 29, 2020)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknown1not providednot provided1not providedclinical testing

Details of each submission

From New York Genome Center - CSER-NYCKidSeq, SCV002097646.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknown1not providednot provided1not providednot providednot provided

Last Updated: Feb 20, 2024