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NM_001288953.2(TTC7A):c.7C>T (p.Pro3Ser) AND not provided

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Apr 13, 2021
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV002223595.10

Allele description [Variation Report for NM_001288953.2(TTC7A):c.7C>T (p.Pro3Ser)]

NM_001288953.2(TTC7A):c.7C>T (p.Pro3Ser)

Genes:
MCFD2:multiple coagulation factor deficiency 2, ER cargo receptor complex subunit [Gene - OMIM - HGNC]
TTC7A:tetratricopeptide repeat domain 7A [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
2p21
Genomic location:
Preferred name:
NM_001288953.2(TTC7A):c.7C>T (p.Pro3Ser)
HGVS:
  • NC_000002.12:g.46917202C>T
  • NG_016428.2:g.29654G>A
  • NG_034143.2:g.6074C>T
  • NM_001171508.2:c.-6-8025G>A
  • NM_001171511.3:c.93-9233G>A
  • NM_001288953.2:c.7C>T
  • NP_001275882.1:p.Pro3Ser
  • LRG_566t3:c.-6-8025G>A
  • LRG_1323:g.6074C>T
  • LRG_566:g.29654G>A
  • NC_000002.11:g.47144341C>T
Protein change:
P3S
Links:
dbSNP: rs1300459632
NCBI 1000 Genomes Browser:
rs1300459632
Molecular consequence:
  • NM_001171508.2:c.-6-8025G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001171511.3:c.93-9233G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001288953.2:c.7C>T - missense variant - [Sequence Ontology: SO:0001583]
Observations:
1

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV002501340AiLife Diagnostics, AiLife Diagnostics
criteria provided, single submitter

(ACMG Guidelines, 2015)
Uncertain significance
(Apr 13, 2021)
germlineclinical testing

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyes1not providednot providednot providednot providedclinical testing

Citations

PubMed

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee..

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]
PMID:
25741868
PMCID:
PMC4544753

Details of each submission

From AiLife Diagnostics, AiLife Diagnostics, SCV002501340.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot provided1not providednot providednot provided

Last Updated: Nov 10, 2024