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NM_004917.5(KLK4):c.637T>C (p.Cys213Arg) AND Amelogenesis imperfecta

Germline classification:
Pathogenic (1 submission)
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV002254672.2

Allele description [Variation Report for NM_004917.5(KLK4):c.637T>C (p.Cys213Arg)]

NM_004917.5(KLK4):c.637T>C (p.Cys213Arg)

Gene:
KLK4:kallikrein related peptidase 4 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
19q13.41
Genomic location:
Preferred name:
NM_004917.5(KLK4):c.637T>C (p.Cys213Arg)
HGVS:
  • NC_000019.10:g.50907062A>G
  • NG_012154.2:g.8677T>C
  • NM_001302961.2:c.352T>C
  • NM_004917.5:c.637T>CMANE SELECT
  • NP_001289890.1:p.Cys118Arg
  • NP_004908.4:p.Cys213Arg
  • NP_004908.4:p.Cys213Arg
  • NC_000019.9:g.51410318A>G
  • NM_004917.4:c.637T>C
  • NR_126566.2:n.626T>C
Protein change:
C118R
Links:
dbSNP: rs1266288524
NCBI 1000 Genomes Browser:
rs1266288524
Molecular consequence:
  • NM_001302961.2:c.352T>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_004917.5:c.637T>C - missense variant - [Sequence Ontology: SO:0001583]
  • NR_126566.2:n.626T>C - non-coding transcript variant - [Sequence Ontology: SO:0001619]

Condition(s)

Name:
Amelogenesis imperfecta (AI)
Synonyms:
Congenital enamel hypoplasia
Identifiers:
MONDO: MONDO:0019507; MedGen: C0002452; OMIM: PS104500; Human Phenotype Ontology: HP:0000705

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV002032322Dental Genetics Laboratory, Seoul National University School of Dentistry
no assertion criteria provided
Pathogenicbiparentalclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedbiparentalyesnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Dental Genetics Laboratory, Seoul National University School of Dentistry, SCV002032322.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1biparentalyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Dec 24, 2023