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NM_020297.4(ABCC9):c.4196dup (p.Ser1400fs) AND multiple conditions

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Jul 26, 2021
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV002484956.1

Allele description [Variation Report for NM_020297.4(ABCC9):c.4196dup (p.Ser1400fs)]

NM_020297.4(ABCC9):c.4196dup (p.Ser1400fs)

Gene:
ABCC9:ATP binding cassette subfamily C member 9 [Gene - OMIM - HGNC]
Variant type:
Duplication
Cytogenetic location:
12p12.1
Genomic location:
Preferred name:
NM_020297.4(ABCC9):c.4196dup (p.Ser1400fs)
Other names:
NM_005691.2:c.4196dupT; p.Ser1400GlnfsX5
HGVS:
  • NC_000012.12:g.21812065dup
  • NG_012819.1:g.129631dup
  • NM_001377273.1:c.4196dup
  • NM_001377274.1:c.3329dup
  • NM_005691.4:c.4196dup
  • NM_020297.4:c.4196dupMANE SELECT
  • NP_001364202.1:p.Ser1400fs
  • NP_001364203.1:p.Ser1111fs
  • NP_005682.2:p.Ser1400fs
  • NP_064693.2:p.Ser1400fs
  • LRG_377t1:c.4196dup
  • LRG_377:g.129631dup
  • NC_000012.11:g.21964999dup
  • NM_005691.3:c.4196dup
  • NM_020297.2:c.4196dupT
Protein change:
S1111fs
Links:
dbSNP: rs730880370
NCBI 1000 Genomes Browser:
rs730880370
Molecular consequence:
  • NM_001377273.1:c.4196dup - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001377274.1:c.3329dup - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_005691.4:c.4196dup - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_020297.4:c.4196dup - frameshift variant - [Sequence Ontology: SO:0001589]

Condition(s)

Name:
Hypertrichotic osteochondrodysplasia Cantu type
Synonyms:
Hypertrichotic osteochondrodysplasia; Cantu syndrome
Identifiers:
MONDO: MONDO:0009406; MedGen: C0795905; Orphanet: 1517; OMIM: 239850
Name:
Dilated cardiomyopathy 1O (CMD1O)
Synonyms:
CARDIOMYOPATHY, DILATED, WITH VENTRICULAR TACHYCARDIA
Identifiers:
MONDO: MONDO:0012062; MedGen: C1837839; Orphanet: 154; OMIM: 608569
Name:
Atrial fibrillation, familial, 12 (ATFB12)
Identifiers:
MONDO: MONDO:0013545; MedGen: C3279695; OMIM: 614050
Name:
Intellectual disability and myopathy syndrome (IDMYS)
Identifiers:
MONDO: MONDO:0859224; MedGen: C5676904; OMIM: 619719

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Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV002781709Fulgent Genetics, Fulgent Genetics
criteria provided, single submitter

(ACMG Guidelines, 2015)		Uncertain significance
(Jul 26, 2021) 		unknownclinical testing

PubMed (1)
[See all records that cite this PMID]

Help

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownunknownnot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee..

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]
PMID:
25741868
PMCID:
PMC4544753

Details of each submission

From Fulgent Genetics, Fulgent Genetics, SCV002781709.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024