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NM_001377304.1(GFI1B):c.782C>G (p.Ser261Cys) AND Platelet-type bleeding disorder 17

Germline classification:
Likely benign (1 submission)
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV003313852.2

Allele description [Variation Report for NM_001377304.1(GFI1B):c.782C>G (p.Ser261Cys)]

NM_001377304.1(GFI1B):c.782C>G (p.Ser261Cys)

Gene:
GFI1B:growth factor independent 1B transcriptional repressor [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
9q34.13
Genomic location:
Preferred name:
NM_001377304.1(GFI1B):c.782C>G (p.Ser261Cys)
HGVS:
  • NC_000009.12:g.132989875C>G
  • NG_034227.1:g.49331C>G
  • NM_001135031.2:c.644C>G
  • NM_001371908.1:c.848C>G
  • NM_001377304.1:c.782C>GMANE SELECT
  • NM_001377305.1:c.644C>G
  • NM_004188.8:c.782C>G
  • NP_001128503.1:p.Ser215Cys
  • NP_001358837.1:p.Ser283Cys
  • NP_001364233.1:p.Ser261Cys
  • NP_001364234.1:p.Ser215Cys
  • NP_004179.3:p.Ser261Cys
  • NP_004179.3:p.Ser261Cys
  • LRG_879t1:c.782C>G
  • LRG_879:g.49331C>G
  • LRG_879p1:p.Ser261Cys
  • NC_000009.11:g.135865262C>G
  • NM_004188.5:c.782C>G
  • NM_004188.7:c.782C>G
Protein change:
S215C
Molecular consequence:
  • NM_001135031.2:c.644C>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001371908.1:c.848C>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001377304.1:c.782C>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001377305.1:c.644C>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_004188.8:c.782C>G - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Platelet-type bleeding disorder 17 (BDPLT17)
Synonyms:
Thrombasthenia-thrombocytopenia, hereditary
Identifiers:
MONDO: MONDO:0008553; MedGen: C1861194; Orphanet: 721; OMIM: 187900

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV004013035ISTH-SSC Genomics in Thrombosis and Hemostasis, KU Leuven, Center for Molecular and Vascular Biology
criteria provided, single submitter

(ACMG Guidelines, 2015)
Likely benigngermlineclinical testing

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyes1not providednot providednot providednot providedclinical testing

Citations

PubMed

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee..

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]
PMID:
25741868
PMCID:
PMC4544753

Details of each submission

From ISTH-SSC Genomics in Thrombosis and Hemostasis, KU Leuven, Center for Molecular and Vascular Biology, SCV004013035.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot provided1not providednot providednot provided

Last Updated: May 7, 2024