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NM_001035.3(RYR2):c.5170G>A (p.Glu1724Lys) AND Long QT syndrome

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Jan 8, 2024
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV003318367.9

Allele description [Variation Report for NM_001035.3(RYR2):c.5170G>A (p.Glu1724Lys)]

NM_001035.3(RYR2):c.5170G>A (p.Glu1724Lys)

Gene:
RYR2:ryanodine receptor 2 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
1q43
Genomic location:
Preferred name:
NM_001035.3(RYR2):c.5170G>A (p.Glu1724Lys)
Other names:
p.E1724K:GAG>AAG
HGVS:
  • NC_000001.11:g.237614298G>A
  • NG_008799.3:g.577115G>A
  • NM_001035.3:c.5170G>AMANE SELECT
  • NP_001026.2:p.Glu1724Lys
  • LRG_402t1:c.5170G>A
  • LRG_402:g.577115G>A
  • LRG_402p1:p.Glu1724Lys
  • NC_000001.10:g.237777598G>A
  • NG_008799.2:g.576897G>A
  • NM_001035.2:c.5170G>A
Protein change:
E1724K
Links:
dbSNP: rs794728740
NCBI 1000 Genomes Browser:
rs794728740
Molecular consequence:
  • NM_001035.3:c.5170G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Long QT syndrome (LQTS)
Identifiers:
MONDO: MONDO:0002442; MeSH: D008133; MedGen: C0023976

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV004022026Dept of Medical Biology, Uskudar University
criteria provided, single submitter

(Dept of Medical Biology Variant Classification)
Pathogenic
(Jan 8, 2024)
de novoresearch

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
Turkishde novoyes1not providednot providednot providednot providedresearch

Details of each submission

From Dept of Medical Biology, Uskudar University, SCV004022026.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1Turkish1not providednot providedresearchnot provided

Description

Criteria: PS2_Strong, PM2, PP2, PP3

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1de novoyesnot providednot providednot provided1not providednot providednot provided

Last Updated: May 1, 2024