NM_001281740.3(FHOD3):c.4324G>T (p.Ala1442Ser) AND Cardiomyopathy, familial hypertrophic, 28

Germline classification:: Uncertain significance (1 submission)
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV003337906.2

Allele description [Variation Report for NM_001281740.3(FHOD3):c.4324G>T (p.Ala1442Ser)]

NM_001281740.3(FHOD3):c.4324G>T (p.Ala1442Ser)

Gene:

FHOD3:formin homology 2 domain containing 3 [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

18q12.2

Genomic location:

Preferred name:

NM_001281740.3(FHOD3):c.4324G>T (p.Ala1442Ser)

HGVS:

NC_000018.10:g.36755210G>T
NG_042837.1:g.462515G>T
NM_001281739.3:c.3748G>T
NM_001281740.3:c.4324G>TMANE SELECT
NM_025135.5:c.3799G>T
NP_001268668.1:p.Ala1250Ser
NP_001268669.1:p.Ala1442Ser
NP_079411.2:p.Ala1267Ser
NC_000018.9:g.34335173G>T

Protein change:

A1250S

Molecular consequence:

NM_001281739.3:c.3748G>T - missense variant - [Sequence Ontology: SO:0001583]
NM_001281740.3:c.4324G>T - missense variant - [Sequence Ontology: SO:0001583]
NM_025135.5:c.3799G>T - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:: Cardiomyopathy, familial hypertrophic, 28
Identifiers:: MONDO: MONDO:0030317; MedGen: C5543616; OMIM: 619402

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

Help

Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV004048327	Neuberg Centre For Genomic Medicine, NCGM	criteria provided, single submitter (ACMG Guidelines, 2015)	Uncertain significance	germline	clinical testing	PubMed (1) [See all records that cite this PMID]

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV004048327

Neuberg Centre For Genomic Medicine, NCGM

criteria provided, single submitter

(ACMG Guidelines, 2015)

Uncertain significance

germline

clinical testing

PubMed (1)
[See all records that cite this PMID]

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	yes	not provided	not provided	not provided	not provided	not provided	clinical testing

Citations

PubMed

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee..

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]

PMID:: 25741868
PMCID:: PMC4544753

Details of each submission

From Neuberg Centre For Genomic Medicine, NCGM, SCV004048327.1

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	PubMed (1)

Description

The missense c.4324G>T(p.Ala1442Ser) variant in FHOD3 gene has not been reported previously as a pathogenic variant nor as a benign variant, to our knowledge. The p.Ala1442Ser variant is observed in 0.0004% alleles in gnomAD Exomes and is novel (not in any individuals) in 1000 Genomes. The amino acid Ala at position 1442 is changed to a Ser changing protein sequence and it might alter its composition and physico-chemical properties. The variant is predicted to be damaging by PolyPhen2 and the residue is conserved across species. The amino acid change p.Ala1442Ser in FHOD3 is predicted as conserved by GERP++ and PhyloP across 100 vertebrates. For these reasons, this variant has been classified as Uncertain Significance.

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	yes	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Apr 6, 2024

ClinVar

Relating variation to medicine