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NM_004594.3(SLC9A5):c.2146_2148del (p.Lys716del) AND not provided

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
May 1, 2022
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV003419363.9

Allele description

NM_004594.3(SLC9A5):c.2146_2148del (p.Lys716del)

Gene:
SLC9A5:solute carrier family 9 member A5 [Gene - OMIM - HGNC]
Variant type:
Deletion
Cytogenetic location:
16q22.1
Genomic location:
Preferred name:
NM_004594.3(SLC9A5):c.2146_2148del (p.Lys716del)
HGVS:
  • NC_000016.10:g.67266153_67266155del
  • NM_001323971.2:c.1843-4585_1843-4583del
  • NM_001323972.2:c.1843_1845del
  • NM_001323973.2:c.2143_2145del
  • NM_001323974.2:c.1258_1260del
  • NM_001323975.2:c.1261_1263del
  • NM_004594.3:c.2146_2148delMANE SELECT
  • NP_001310901.1:p.Lys615del
  • NP_001310902.1:p.Lys715del
  • NP_001310903.1:p.Lys420del
  • NP_001310904.1:p.Lys421del
  • NP_004585.1:p.Lys716del
  • NC_000016.9:g.67300056_67300058del
  • NR_136664.2:n.2174_2176del
  • NR_136665.2:n.1972_1974del
  • NR_136666.2:n.1933_1935del
  • NR_136667.2:n.1858_1860del
Protein change:
K420del
Molecular consequence:
  • NM_001323972.2:c.1843_1845del - inframe_deletion - [Sequence Ontology: SO:0001822]
  • NM_001323973.2:c.2143_2145del - inframe_deletion - [Sequence Ontology: SO:0001822]
  • NM_001323974.2:c.1258_1260del - inframe_deletion - [Sequence Ontology: SO:0001822]
  • NM_001323975.2:c.1261_1263del - inframe_deletion - [Sequence Ontology: SO:0001822]
  • NM_004594.3:c.2146_2148del - inframe_deletion - [Sequence Ontology: SO:0001822]
  • NM_001323971.2:c.1843-4585_1843-4583del - intron variant - [Sequence Ontology: SO:0001627]
  • NR_136664.2:n.2174_2176del - non-coding transcript variant - [Sequence Ontology: SO:0001619]
  • NR_136665.2:n.1972_1974del - non-coding transcript variant - [Sequence Ontology: SO:0001619]
  • NR_136666.2:n.1933_1935del - non-coding transcript variant - [Sequence Ontology: SO:0001619]
  • NR_136667.2:n.1858_1860del - non-coding transcript variant - [Sequence Ontology: SO:0001619]
Observations:
1

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

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Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV004139955CeGaT Center for Human Genetics Tuebingen
criteria provided, single submitter

(CeGaT Center For Human Genetics Tuebingen Variant Classification Criteria Version 2)		Uncertain significance
(May 1, 2022) 		germlineclinical testing

Citation Link

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Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyes1not providednot providednot providednot providedclinical testing

Details of each submission

From CeGaT Center for Human Genetics Tuebingen, SCV004139955.9

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot provided1not providednot providednot provided

Last Updated: Oct 8, 2024