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NM_033409.4(SLC52A3):c.802C>T (p.Arg268Trp) AND Auditory neuropathy

Germline classification:
Likely pathogenic (1 submission)
Last evaluated:
Dec 22, 2023
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV003483781.1

Allele description [Variation Report for NM_033409.4(SLC52A3):c.802C>T (p.Arg268Trp)]

NM_033409.4(SLC52A3):c.802C>T (p.Arg268Trp)

Gene:
SLC52A3:solute carrier family 52 member 3 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
20p13
Genomic location:
Preferred name:
NM_033409.4(SLC52A3):c.802C>T (p.Arg268Trp)
HGVS:
  • NC_000020.11:g.763769G>A
  • NG_027687.2:g.17217C>T
  • NM_001370085.1:c.802C>T
  • NM_001370086.1:c.802C>T
  • NM_033409.4:c.802C>TMANE SELECT
  • NP_001357014.1:p.Arg268Trp
  • NP_001357015.1:p.Arg268Trp
  • NP_212134.3:p.Arg268Trp
  • LRG_1394t1:c.802C>T
  • LRG_1394:g.17217C>T
  • LRG_1394p1:p.Arg268Trp
  • NC_000020.10:g.744413G>A
  • NG_027687.1:g.9816C>T
  • NM_001370086.1:c.802C>T
  • NM_033409.3:c.802C>T
Protein change:
R268W
Links:
dbSNP: rs145498634
NCBI 1000 Genomes Browser:
rs145498634
Molecular consequence:
  • NM_001370085.1:c.802C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001370086.1:c.802C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_033409.4:c.802C>T - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Auditory neuropathy
Synonyms:
Auditory dys-synchrony
Identifiers:
MONDO: MONDO:0021944; MedGen: C1852271; OMIM: PS609129

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV004229045WangQJ Lab, Chinese People's Liberation Army General Hospital
criteria provided, single submitter

(Submitter's publication)
Likely pathogenic
(Dec 22, 2023)
germlineresearch

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
Asiangermlineyes1not providednot providednot providednot providedresearch

Details of each submission

From WangQJ Lab, Chinese People's Liberation Army General Hospital, SCV004229045.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1Asian1not providednot providedresearchnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot provided1not providednot providednot provided

Last Updated: May 1, 2024