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NM_033380.3(COL4A5):c.4321C>T (p.Arg1441Cys) AND X-linked Alport syndrome

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Jul 18, 2023
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV003984941.2

Allele description [Variation Report for NM_033380.3(COL4A5):c.4321C>T (p.Arg1441Cys)]

NM_033380.3(COL4A5):c.4321C>T (p.Arg1441Cys)

Gene:
COL4A5:collagen type IV alpha 5 chain [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
Xq22.3
Genomic location:
Preferred name:
NM_033380.3(COL4A5):c.4321C>T (p.Arg1441Cys)
HGVS:
  • NC_000023.11:g.108687487C>T
  • NG_011977.2:g.252564C>T
  • NM_000495.5:c.4303C>T
  • NM_033380.3:c.4321C>TMANE SELECT
  • NP_000486.1:p.Arg1435Cys
  • NP_203699.1:p.Arg1441Cys
  • LRG_232t1:c.4303C>T
  • LRG_232t2:c.4321C>T
  • LRG_232:g.252564C>T
  • LRG_232p1:p.Arg1435Cys
  • LRG_232p2:p.Arg1441Cys
  • NC_000023.10:g.107930717C>T
Protein change:
R1435C
Molecular consequence:
  • NM_000495.5:c.4303C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_033380.3:c.4321C>T - missense variant - [Sequence Ontology: SO:0001583]
Observations:
1

Condition(s)

Name:
X-linked Alport syndrome (ATS1)
Synonyms:
NEPHROPATHY AND DEAFNESS, X-LINKED; Alport syndrome 1, X-linked recessive; Alport Syndrome and Thin Basement Membrane Nephropathy
Identifiers:
MONDO: MONDO:0010520; MedGen: C4746986; Orphanet: 63; Orphanet: 88917; OMIM: 301050

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV004801056MVZ Medizinische Genetik Mainz
criteria provided, single submitter

(UK Practice Guidelines For Variant Classification V4 01 2020)
Uncertain significance
(Jul 18, 2023)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyes1not providednot providednot providednot providedclinical testing

Details of each submission

From MVZ Medizinische Genetik Mainz, SCV004801056.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedclinical testingnot provided

Description

PP3_MOD,PM2_SUP

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot provided1not providednot providednot provided

Last Updated: Jun 2, 2024